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- Proteins & Proteomes
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- Database
UniProtKB
Protein sequence database
Structural Biology
SWISS-MODEL Repository
0 hit
Protein structure homology models
ModelArchive
0 hit
Repository of predicted macromolecular structure models
SwissDock
Docking of small ligands into protein active sites
System Biology
MetaNetX
Metabolic network repository & analysis
Cellosaurus
0 hit
Knowledge resource on cell lines
Genes & Genomes
Bgee
0 hit
Gene expression expertise
Evolution & Phylogeny
OMA
0 hit
Orthology inference among complete genomes
OrthoDB
0 hit
Ortholog evolutionary and functional annotations
Selectome
Database of positive selection
Proteins & Proteomes
PROSITE
0 hit
Protein family and domain database
STRING
0 hit
Protein-protein interaction networks and enrichment analysis
UniProtKB
0 hit
Protein sequence database
ViralZone
0 hit
Fact sheets about viruses linked to sequence databases
ENZYME
Enzyme nomenclature database
HAMAP
0 hit
UniProtKB family classification and annotation
MyHits
Relationships between protein sequences and motifs
SwissLipids
0 hit
Knowledge resource for lipids
VenomZone
0 hit
Portal to venom protein UniProtKB entries
Protein Universe Atlas
Interactive, annotated similarity network of all proteins
27 resources found for FASTA-like (text)
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- Evolution & Phylogeny
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- Database
OrthoDB
Ortholog evolutionary and functional annotations-
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- Evolution & Phylogeny
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- Database
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- Software tool
OMA
Orthology inference among complete genomes-
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- Genomics
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- Software tool
ShoRAH
Analysis of NGS data-
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- Genes & Genomes
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- Evolution & Phylogeny
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- Software tool
REALPHY
Inference of phylogenetic trees from genome data-
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- Genes & Genomes
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- Software tool
ESTscan
Detect coding regions in EST sequences-
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- Genomics
- , Transcriptomics
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- Evolution biology
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- Software tool
BUSCO
From QC to gene prediction and phylogenomics-
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- Proteins & Proteomes
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- Database
UniProtKB/Swiss-Prot
Protein knowledgebase-
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- Proteins & Proteomes
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- Software tool
Sulfinator
Predict tyrosine sulfation sites in protein sequences-
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- Proteins & Proteomes
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- Software tool
RandSeq
Random protein sequence generator-
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- Proteins & Proteomes
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- Software tool
PRATT
Conserved patterns in a set of protein sequences-
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- Proteins & Proteomes
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- Software tool
HAMAP-Scan
Scanning of protein sequences against HAMAP families-
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- Proteins & Proteomes
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- Software tool
Decrease redundancy
Redundancy reduction in a set of sequences-
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- Proteins & Proteomes
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- Software tool
UniProt ClustalO
Align two or more protein sequences-
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- Proteins & Proteomes
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- Software tool
UniProt BLAST
BLAST sequence similarity search on the UniProt web site-
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- Genomics
- , Transcriptomics
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- Systems Biology
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- Software tool
CRUNCH
Automated pipeline for ChIP-seq data analysis-
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- Proteins & Proteomes
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- Structural Biology
- , Structural analysis
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- Software tool
SWISS-MODEL Workspace
Fully automated protein structure homology-modeling server-
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- Genomics
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- Systems Biology
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- Software tool
Phylogibbs
Regulatory sites in a collection of DNA sequences-
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- Proteins & Proteomes
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- Software tool
ScanProsite
Protein sequences against PROSITE-
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- Genes & Genomes
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- Evolution & Phylogeny
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- Database
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- Software tool
SwissOrthology
One-stop shop for orthologs-
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- Evolution & Phylogeny
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- Software tool
OrthoLoger
Accurate and scalable inference of groups of orthologs-
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- Genes & Genomes
- , Genomics
- , Metagenomics
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- Software tool
mVIRs
Prediction tool for inducible, bacteria-infecting viruses-
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- Genomics
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- Evolution & Phylogeny
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- Software tool
Nextclade
Clade assignment, mutation calling & QC for virus sequences-
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- Genes & Genomes
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- Evolution biology
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- Software tool
BEAST2
Bayesian evolutionary analysis by sampling trees-
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- Genomics
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- Evolution biology
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- Software tool
GenSpectrum
Real-time pathogen genomic sequence analysis-
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- Proteins & Proteomes
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- Software tool
OMArk
OMArk determines the quality and completeness of gene sets-
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- Genomics
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- Database
Pathoplexus
Human viral pathogen genomic data sharing platform-