HMO-Glycologue

  • Glycomics
  • Software tool
Built from a model of the de novo biosynthesis of Human Milk Oligosaccharides, HMO-Glycologue is a method for generating networks of reactions based on the activities of a manually curated set of human glycosyltransferases. It can the predict the effect of enzyme knock-out on the network.

You might also be interested in

      • Proteins & Proteomes
      • Systems Biology
      • Database
      • Software tool

    STRING

    Protein-protein interaction networks and enrichment analysis
      • Glycomics
      • Software tool

    Glydin'

    Network representation of known glycan determinants
      • Glycomics
      • Software tool

    EpitopeXtractor

    Compare glycan structures to Glydin' network's collection
      • Proteins & Proteomes
      • Database

    UniProtKB

    Protein sequence database
      • Proteins & Proteomes
      • Lipidomics
      • Database

    SwissLipids

    Knowledge resource for lipids
      • Proteins & Proteomes
      • Systems Biology
      • , Metabolomics
      • Database

    Rhea

    Expert-curated database of biochemical reactions
      • Proteins & Proteomes
      • Database

    ENZYME

    Enzyme nomenclature database
      • Proteins & Proteomes
      • Systems Biology
      • , Metabolomics
      • Database

    Rhea SPARQL endpoint

    SPARQL access to the Rhea knowledgebase
      • Systems Biology
      • Software tool

    OMAMO

    OMAMO allows the user to find the best simple model organism
      • Proteins & Proteomes
      • Systems Biology
      • Database

    TCS

    Predict interaction specificity in bacterial signalling
      • Glycomics
      • Database

    UniCarb-DB

    Glycan structures and associated mass spectrometry data
      • Proteins & Proteomes
      • Glycomics
      • Software tool

    Swiss Mass Abacus

    Intuitive calculator of peptide and glycopeptide masses
      • Glycomics
      • Software tool

    SugarSketcher

    Fast, intuitive, SNFG-compliant glycan structure drawing
      • Glycomics
      • Database

    SugarBind

    Pathogen Sugar-Binding Database
      • Glycomics
      • Software tool

    GlyS3

    Match a glycan substructure to a database of full structures
      • Glycomics
      • Software tool

    Glynsight

    Visualise and compare glycan expression profiles
      • Proteins & Proteomes
      • Glycomics
      • Software tool

    GlycoSiteAlign

    Multiple alignment of sequences around glycosylation sites
      • Proteins & Proteomes
      • Glycomics
      • Database
      • Software tool

    GlyConnect

    Integrated data platform to study glycosylation
      • Glycomics
      • Software tool

    GlycoDigest

    In silico digestion of glycans by exoglycosidases
      • Proteins & Proteomes
      • Glycomics
      • Software tool

    GlycoMod

    Possible oligosaccharide structures on proteins from masses
      • Proteins & Proteomes
      • Glycomics
      • Database

    Glyco@Expasy

    Zooming in on web-based glycoinformatics resources
      • Glycomics
      • Database

    GAG-DB

    3D structures of glycosaminoglycans
      • Proteins & Proteomes
      • Glycomics
      • Software tool

    MzJava

    Open source Java class library to process MS fragmentation
      • Proteins & Proteomes
      • Glycomics
      • Database

    UniLectin

    Structural and functional classification of lectins
      • Metabolomics
      • Software tool

    MSight

    Mass Spectrometry Imager
      • Proteins & Proteomes
      • Systems Biology
      • Database
      • Software tool

    MetaNetX

    Metabolic network repository & analysis
      • Proteins & Proteomes
      • Software tool

    PeptideCutter

    Potential cleavage sites in a protein
      • Proteins & Proteomes
      • Database

    EnzChemRED

    Enzyme Chemistry Relation Extraction Dataset