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- Proteins & Proteomes
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- Systems Biology
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- Database
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- Software tool
STRING
Protein-protein interaction networks and enrichment analysis
SwissLipids SPARQL endpoint
- Proteins & Proteomes
- Lipidomics
- Database
SPARQL access to SwissLipids, the knowledgebase that links mass spectrometry-based lipid identifications to curated knowledge of lipid structures, metabolic reactions, enzymes, and interacting proteins. It provides a framework for the integration of lipid and lipidomics data with biological knowledge and models.
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Network representation of known glycan determinants-
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UniProtKB/Swiss-Prot
Protein knowledgebase-
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UniProtKB
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SwissLipids
Knowledge resource for lipids-
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Enzyme nomenclature database-
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UniProt SPARQL endpoint
SPARQL access to UniProt and related data-
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- Database
Rhea SPARQL endpoint
SPARQL access to the Rhea knowledgebase-
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HMO-Glycologue
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STRING SPARQL endpoint
SPARQL access to the STRING knowledgebase-
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OMAMO
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- Proteins & Proteomes
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- Systems Biology
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TCS
Predict interaction specificity in bacterial signalling-
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- Proteins & Proteomes
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SwissDock
Docking of small ligands into protein active sites-
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SwissTargetPrediction
Target prediction for bioactive small molecules-
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SwissSimilarity
Ligand-based virtual screening-
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Topology and parameters for small molecules-
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SwissBioIsostere
Database of molecular replacements for ligand design-
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SwissADME
Pharmacokinetics properties and druglikeness-
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VenomZone
Portal to venom protein UniProtKB entries-
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Click2Drug
Directory of computational drug design tools-
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- Drug design
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SwissDrugDesign
Widening access to computer-aided drug design-
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MzJava
Open source Java class library to process MS fragmentation-
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MSight
Mass Spectrometry Imager-
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MetaNetX
Metabolic network repository & analysis-
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- Glycomics
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GlycoDigest
In silico digestion of glycans by exoglycosidases-
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- Proteins & Proteomes
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PeptideCutter
Potential cleavage sites in a protein-
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MetaNetX SPARQL endpoint
SPARQL access to MetaNetX-
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EnzChemRED
Enzyme Chemistry Relation Extraction Dataset-