Structural Biology

SWISS-MODEL Repository

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Protein structure homology models

ModelArchive

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Repository of predicted macromolecular structure models

SwissDock

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Docking of small ligands into protein active sites

System Biology

MetaNetX

Metabolic network repository & analysis

Cellosaurus

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Knowledge resource on cell lines

Genes & Genomes

Bgee

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Gene expression expertise

Evolution & Phylogeny

Orthology inference among complete genomes

OrthoDB

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Ortholog evolutionary and functional annotations

Selectome

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Database of positive selection

Proteins & Proteomes

PROSITE

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Protein family and domain database

STRING

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Protein-protein interaction networks and enrichment analysis

UniProtKB

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Protein sequence database

ViralZone

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Fact sheets about viruses linked to sequence databases

ENZYME

Enzyme nomenclature database

HAMAP

UniProtKB family classification and annotation

MyHits

Relationships between protein sequences and motifs

SwissLipids

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Knowledge resource for lipids

VenomZone

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Portal to venom protein UniProtKB entries

Protein Universe Atlas

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Interactive, annotated similarity network of all proteins

9 resources found for Omics

      • Population genetics
      • Genomics
      • Software tool

    V-pipe

    Viral genomics pipeline
      • Genomics
      • Software tool

    ShoRAH

    Analysis of NGS data
      • Proteins & Proteomes
      • Database
      • Software tool

    PaxDb

    Protein abundance across several organisms
      • Evolution biology
      • Genomics
      • Software tool

    Nextstrain

    Impact of pathogen genome data on science and public health
      • Evolution biology
      • Genomics
      • Software tool

    CT-CBN

    Estimate conjunctive Bayesian networks
      • Metabolomics
      • Proteins & Proteomes
      • Software tool

    rawrr

    R package for fast reading Thermo Fisher Scientific MS data
      • Transcriptomics
      • Software tool

    ASAP

    Web-based, cooperative portal for single-cell data analyses
      • Text mining & Machine learning
      • Database
      • Software tool

    SIBiLS

    Personalized information retrieval from the literature
      • Evolution biology
      • Genomics
      • Software tool

    GenSpectrum

    Real-time pathogen genomic sequence analysis