Expasy: Swiss Bioinformatics Resource Portal
e.g. BLAST, UniProt, MSH6, Albumin...

Structural Biology

SWISS-MODEL Repository

0 hit
Protein structure homology models

ModelArchive

1 hit
Repository of predicted macromolecular structure models

SwissDock

Docking of small ligands into protein active sites

System Biology

MetaNetX

Metabolic network repository & analysis

Cellosaurus

Knowledge resource on cell lines

Genes & Genomes

Bgee

0 hit
Gene expression expertise

Evolution & Phylogeny

OMA

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Orthology inference among complete genomes

OrthoDB

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Ortholog evolutionary and functional annotations

Selectome

Database of positive selection

Proteins & Proteomes

PROSITE

Protein family and domain database

STRING

Protein-protein interaction networks and enrichment analysis

UniProtKB

Protein sequence database

ViralZone

Fact sheets about viruses linked to sequence databases

ENZYME

Enzyme nomenclature database

HAMAP

UniProtKB family classification and annotation

MyHits

Relationships between protein sequences and motifs

SwissLipids

Knowledge resource for lipids

VenomZone

Portal to venom protein UniProtKB entries

Protein Universe Atlas

Interactive, annotated similarity network of all proteins

19 resources found for Nucleic acid sequence analysis

      • Genomics
      • Population genetics
      • Software tool

    V-pipe

    Viral genomics pipeline
      • Population genetics
      • Software tool

    Arlequin

    An integrated software for population genetics data analysis
      • Genomics
      • Software tool

    ShoRAH

    Analysis of NGS data
      • Genes & Genomes
      • , Genomics
      • Systems Biology
      • Database
      • Software tool

    Progenetix

    Genomic profiles of cancer samples with focus on CNV
      • Genomics
      • Systems Biology
      • Database
      • Software tool

    arrayMAP

    Curated array data repository for cancer genomics
      • Metagenomics
      • Population genetics
      • Database
      • Software tool

    mOTUs

    Microbial taxonomic and population genomic profiler
      • Genomics
      • Software tool

    IScan

    Insertion sequence identification in whole genomes
      • Genomics
      • , Transcriptomics
      • Evolution biology
      • Software tool

    BUSCO

    From QC to gene prediction and phylogenomics
      • Genomics
      • , Transcriptomics
      • Systems Biology
      • Software tool

    ISMARA

    Webservice for gene expression and epigenetic data analysis
      • Genomics
      • Systems Biology
      • Software tool

    Phylogibbs

    Regulatory sites in a collection of DNA sequences
      • Genomics
      • Population genetics
      • Software tool

    V-pipe SARS-CoV-2

    V-pipe pipeline for SARS-CoV-2 sequencing data
      • Metagenomics
      • Software tool

    LEMMI

    Continuous benchmarking of methods for metagenomics
      • Transcriptomics
      • Software tool

    ASAP

    Web-based, cooperative portal for single-cell data analyses
      • Evolution & Phylogeny
      • Software tool

    raxmlGUI

    raxmlGUI 2.0 is a graphical user interface to RAxML
      • Genes & Genomes
      • , Genomics
      • , Metagenomics
      • Software tool

    mVIRs

    Prediction tool for inducible, bacteria-infecting viruses
      • Genomics
      • Evolution & Phylogeny
      • Software tool

    Nextclade

    Clade assignment, mutation calling & QC for virus sequences
      • Genomics
      • Evolution biology
      • Software tool

    GenSpectrum

    Real-time pathogen genomic sequence analysis
      • Genomics
      • Database

    Pathoplexus

    Human viral pathogen genomic data sharing platform