Structural Biology

SWISS-MODEL Repository

Protein structure homology models

ModelArchive

Repository of predicted macromolecular structure models

SwissDock

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Docking of small ligands into protein active sites

System Biology

MetaNetX

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Metabolic network repository & analysis

Cellosaurus

Knowledge resource on cell lines

Genes & Genomes

Bgee

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Gene expression expertise

Evolution & Phylogeny

Orthology inference among complete genomes

OrthoDB

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Ortholog evolutionary and functional annotations

Selectome

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Database of positive selection

Proteins & Proteomes

PROSITE

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Protein family and domain database

STRING

Protein-protein interaction networks and enrichment analysis

UniProtKB

Protein sequence database

ViralZone

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Fact sheets about viruses linked to sequence databases

ENZYME

Enzyme nomenclature database

HAMAP

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UniProtKB family classification and annotation

MyHits

Relationships between protein sequences and motifs

SwissLipids

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Knowledge resource for lipids

VenomZone

Portal to venom protein UniProtKB entries

Protein Universe Atlas

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Interactive, annotated similarity network of all proteins

10 resources found for Model organisms

      • Transcriptomics
      • Evolution biology
      • Database
      • Software tool

    Bgee

    Gene expression expertise
      • Systems Biology
      • Transcriptomics
      • , Genomics
      • Software tool

    CRUNCH

    Automated pipeline for ChIP-seq data analysis
      • Genes & Genomes
      • , Genomics
      • , Transcriptomics
      • Evolution & Phylogeny
      • Systems Biology
      • Database
      • Software tool

    SwissRegulon Portal

    Tools and data for regulatory genomics
      • Evolution biology
      • Transcriptomics
      • Database

    Bgee SPARQL endpoint

    SPARQL access to the Bgee gene expression database
      • Systems Biology
      • Software tool

    OMAMO

    OMAMO allows the user to find the best simple model organism
      • Genes & Genomes
      • Systems Biology
      • Software tool

    CREMA

    Cis-Regulatory Element Motif Activities