Expasy: Swiss Bioinformatics Resource Portal
e.g. BLAST, UniProt, MSH6, Albumin...

SwissRegulon Portal

  • Genes & Genomes
  • Evolution & Phylogeny
  • Systems Biology
  • Database
  • Software tool
The SwissRegulon Portal provides resources for regulatory genomics, including ISMARA for the automated inference of regulatory networks, CRUNCH for the automated analysis of ChIPseq data, and REALPHY for reconstructing phylogenies from raw sequence data.

💡Genome-wide annotations of regulatory sites and motifs for 6 model organisms are also available.
Browse the resource website

You might also be interested in

      • Genes & Genomes
      • Evolution & Phylogeny
      • Software tool

    REALPHY

    Inference of phylogenetic trees from genome data
      • Genes & Genomes
      • Evolution biology
      • Software tool

    BEAST2

    Bayesian evolutionary analysis by sampling trees
      • Genomics
      • Evolution biology
      • Software tool

    Nextstrain

    Impact of pathogen genome data on science and public health
      • Genomics
      • Evolution & Phylogeny
      • Software tool

    Nextclade

    Clade assignment, mutation calling & QC for virus sequences
      • Proteins & Proteomes
      • Software tool

    pftools

    Build, calibrate, and search biological sequences
      • Genes & Genomes
      • , Genomics
      • , Metagenomics
      • Software tool

    mVIRs

    Prediction tool for inducible, bacteria-infecting viruses
      • Genomics
      • , Transcriptomics
      • Systems Biology
      • Software tool

    ISMARA

    Webservice for gene expression and epigenetic data analysis
      • Genes & Genomes
      • Systems Biology
      • Software tool

    CREMA

    Cis-Regulatory Element Motif Activities
      • Transcriptomics
      • Systems Biology
      • Software tool

    DWT-online

    Dinucleotide Weight Tensor toolbox and visualisation service
      • Genomics
      • , Transcriptomics
      • Systems Biology
      • Database

    SwissRegulon

    Database of genome-wide annotations of regulatory sites
      • Systems Biology
      • Software tool

    OMAMO

    OMAMO allows the user to find the best simple model organism
      • Genomics
      • , Transcriptomics
      • Systems Biology
      • Software tool

    CRUNCH

    Automated pipeline for ChIP-seq data analysis
      • Genomics
      • Software tool

    MADAP

    Clustering tool of genomic sites
      • Genomics
      • Software tool

    ChIP-Seq

    ChIP-Seq data analysis tools
      • Genomics
      • Systems Biology
      • Software tool

    Phylogibbs

    Regulatory sites in a collection of DNA sequences