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- Transcriptomics
- , Genomics
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- Systems Biology
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- Database
SwissRegulon
Database of genome-wide annotations of regulatory sites
Structural Biology
SWISS-MODEL Repository
Protein structure homology models
ModelArchive
Repository of predicted macromolecular structure models
SwissDock
Docking of small ligands into protein active sites
System Biology
MetaNetX
Metabolic network repository & analysis
Cellosaurus
Knowledge resource on cell lines
Genes & Genomes
Bgee
0 hit
Gene expression expertise
Evolution & Phylogeny
OMA
0 hit
Orthology inference among complete genomes
OrthoDB
0 hit
Ortholog evolutionary and functional annotations
Selectome
Database of positive selection
Proteins & Proteomes
PROSITE
0 hit
Protein family and domain database
STRING
Protein-protein interaction networks and enrichment analysis
UniProtKB
Protein sequence database
ViralZone
0 hit
Fact sheets about viruses linked to sequence databases
ENZYME
Enzyme nomenclature database
HAMAP
0 hit
UniProtKB family classification and annotation
MyHits
Relationships between protein sequences and motifs
SwissLipids
0 hit
Knowledge resource for lipids
VenomZone
0 hit
Portal to venom protein UniProtKB entries
Protein Universe Atlas
Interactive, annotated similarity network of all proteins
9 resources found for Transcription factors and regulatory sites
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- Genomics
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- Software tool
MADAP
Clustering tool of genomic sites-
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- Genomics
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- Software tool
ChIP-Seq
ChIP-Seq data analysis tools-
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- Systems Biology
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- Transcriptomics
- , Genomics
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- Software tool
CRUNCH
Automated pipeline for ChIP-seq data analysis-
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- Genomics
- , Transcriptomics
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- Systems Biology
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- Software tool
ISMARA
Webservice for gene expression and epigenetic data analysis-
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- Genomics
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- Systems Biology
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- Software tool
Phylogibbs
Regulatory sites in a collection of DNA sequences-
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- Genes & Genomes
- , Genomics
- , Transcriptomics
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- Evolution & Phylogeny
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- Systems Biology
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- Database
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- Software tool
SwissRegulon Portal
Tools and data for regulatory genomics-
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- Genes & Genomes
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- Systems Biology
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- Software tool
CREMA
Cis-Regulatory Element Motif Activities-
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- Transcriptomics
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- Systems Biology
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- Software tool
DWT-online
Dinucleotide Weight Tensor toolbox and visualisation service-