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- Proteins & Proteomes
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- Database
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- Software tool
MyHits
Relationships between protein sequences and motifs
Structural Biology
SWISS-MODEL Repository
Protein structure homology models
ModelArchive
Repository of predicted macromolecular structure models
SwissDock
Docking of small ligands into protein active sites
System Biology
MetaNetX
Metabolic network repository & analysis
Cellosaurus
0 hit
Knowledge resource on cell lines
Genes & Genomes
Bgee
0 hit
Gene expression expertise
Evolution & Phylogeny
OMA
Orthology inference among complete genomes
OrthoDB
Ortholog evolutionary and functional annotations
Selectome
Database of positive selection
Proteins & Proteomes
PROSITE
Protein family and domain database
STRING
Protein-protein interaction networks and enrichment analysis
UniProtKB
Protein sequence database
ViralZone
Fact sheets about viruses linked to sequence databases
ENZYME
Enzyme nomenclature database
HAMAP
0 hit
UniProtKB family classification and annotation
MyHits
Relationships between protein sequences and motifs
SwissLipids
0 hit
Knowledge resource for lipids
VenomZone
Portal to venom protein UniProtKB entries
Protein Universe Atlas
0 hit
Interactive, annotated similarity network of all proteins
26 resources found for Sequence alignment
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- Genomics
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- Evolution biology
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- Database
Selectome
Database of positive selection-
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- Proteins & Proteomes
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- Database
PROSITE
Protein family and domain database-
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- Proteins & Proteomes
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- Structural Biology
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- Database
SWISS-MODEL Repository
Protein structure homology models-
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- Proteins & Proteomes
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- Database
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- Software tool
HAMAP
UniProtKB family classification and annotation-
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- Proteins & Proteomes
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- Database
VenomZone
Portal to venom protein UniProtKB entries-
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- Genomics
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- Software tool
TagScan
Genome-wide sequence tag scanner-
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- Genomics
- , Transcriptomics
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- Software tool
SIBsim4
Align expressed RNA sequences on a DNA template-
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- Genes & Genomes
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- Evolution & Phylogeny
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- Software tool
REALPHY
Inference of phylogenetic trees from genome data-
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- Genomics
- , Transcriptomics
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- Software tool
QuasR
Quantification and analysis of Short Reads-
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- Proteins & Proteomes
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- Software tool
pftools
Build, calibrate, and search biological sequences-
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- Proteins & Proteomes
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- Glycomics
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- Software tool
GlycoSiteAlign
Multiple alignment of sequences around glycosylation sites-
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- Genomics
- , Transcriptomics
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- Software tool
FetchGWI / tagger
Short sequence mapping-
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- Proteins & Proteomes
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- Software tool
Sulfinator
Predict tyrosine sulfation sites in protein sequences-
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- Proteins & Proteomes
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- Software tool
SIM
Alignment of two protein sequences or within a sequence-
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- Proteins & Proteomes
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- Software tool
PRATT
Conserved patterns in a set of protein sequences-
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- Proteins & Proteomes
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- Software tool
HAMAP-Scan
Scanning of protein sequences against HAMAP families-
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- Proteins & Proteomes
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- Software tool
Decrease redundancy
Redundancy reduction in a set of sequences-
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- Proteins & Proteomes
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- Software tool
UniProt ClustalO
Align two or more protein sequences-
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- Proteins & Proteomes
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- Software tool
Dotlet
Regions of close similarity in 2 sequences-
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- Proteins & Proteomes
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- Structural Biology
- , Structural analysis
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- Software tool
SWISS-MODEL Workspace
Fully automated protein structure homology-modeling server-
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- Proteins & Proteomes
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- Software tool
ScanProsite
Protein sequences against PROSITE-
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- Genes & Genomes
- , Genomics
- , Transcriptomics
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- Evolution & Phylogeny
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- Systems Biology
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- Database
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- Software tool
SwissRegulon Portal
Tools and data for regulatory genomics-
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- Proteins & Proteomes
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- Database
HAMAP SPARQL endpoint
SPARQL access to the HAMAP annotation rules-
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- Genes & Genomes
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- Database
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- Software tool
SPSP | Swiss Pathogen Surveillance Platform
Public Swiss pathogen NGS data-
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- Genomics
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- Evolution & Phylogeny
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- Software tool
Nextclade
Clade assignment, mutation calling & QC for virus sequences-