e.g. BLAST, UniProt, MSH6, Albumin...

Structural Biology

SWISS-MODEL Repository

Error while retrieving the hits
Protein structure homology models

ModelArchive

Error while retrieving the hits
Repository of predicted macromolecular structure models

SwissDock

Error while retrieving the hits
Docking of small ligands into protein active sites

System Biology

MetaNetX

Error while retrieving the hits
Metabolic network repository & analysis

Cellosaurus

Error while retrieving the hits
Knowledge resource on cell lines

Genes & Genomes

Bgee

Error while retrieving the hits
Gene expression expertise

Evolution & Phylogeny

OMA

Error while retrieving the hits
Orthology inference among complete genomes

OrthoDB

Error while retrieving the hits
Ortholog evolutionary and functional annotations

Selectome

Error while retrieving the hits
Database of positive selection

Proteins & Proteomes

PROSITE

Error while retrieving the hits
Protein family and domain database

STRING

Error while retrieving the hits
Protein-protein interaction networks and enrichment analysis

UniProtKB

Error while retrieving the hits
Protein sequence database

ViralZone

Error while retrieving the hits
Factsheets about viruses linked to sequence databases

ENZYME

Error while retrieving the hits
Enzyme nomenclature database

HAMAP

Error while retrieving the hits
UniProtKB family classification and annotation

SwissLipids

Error while retrieving the hits
Knowledge resource for lipids

VenomZone

Error while retrieving the hits
Portal to venom protein UniProtKB entries

Protein Universe Atlas

Error while retrieving the hits
Interactive, annotated similarity network of all proteins
Search results: database and tool description

36 resources found for Alignment

      • Genomics
      • Evolution biology
      • Database

    Selectome
    Database of positive selection
      • Proteins & Proteomes
      • Database
      • Software tool

    HAMAP
    UniProtKB family classification and annotation
      • Proteins & Proteomes
      • Database

    VenomZone
    Portal to venom protein UniProtKB entries
      • Genomics
      • Software tool

    SSA
    Analysis of nucleic acid sequence motifs
      • Transcriptomics
      • Software tool

    SIBsim4
    Align expressed RNA sequences on a DNA template
      • Genomics
      • Software tool

    ShoRAH
    Analysis of NGS data
      • Genes & Genomes
      • Evolution & Phylogeny
      • Software tool

    REALPHY
    Inference of phylogenetic trees from genome data
      • Transcriptomics
      • Software tool

    QuasR
    Quantification and analysis of Short Reads
      • Proteins & Proteomes
      • Software tool

    pftools
    Build, calibrate, and search biological sequences
      • Proteins & Proteomes
      • Glycomics
      • Software tool

    GlycoSiteAlign
    Multiple alignment of sequences around glycosylation sites
      • Proteins & Proteomes
      • Software tool

    Sulfinator
    Predict tyrosine sulfation sites in protein sequences
      • Proteins & Proteomes
      • Software tool

    SIM
    Alignment of two protein sequences or within a sequence
      • Proteins & Proteomes
      • Software tool

    PRATT
    Conserved patterns in a set of protein sequences
      • Proteins & Proteomes
      • Software tool

    HAMAP-Scan
    Scanning of protein sequences against HAMAP families
      • Genomics
      • Database
      • Software tool

    ChIP-Seq
    ChIP-Seq data analysis tools
      • Proteins & Proteomes
      • Software tool

    Dotlet
    Regions of close similarity in 2 sequences
      • Systems Biology
      • Software tool

    CLASTR
    Cellosaurus STR similarity search tool
      • Proteins & Proteomes
      • Structural analysis
      • Software tool

    SWISS-MODEL Workspace
    Fully automated protein structure homology-modeling server
      • Transcriptomics
      • Systems Biology
      • Software tool

    ISMARA
    Webservice for gene expression and epigenetic data analysis
      • Genomics
      • Systems Biology
      • Software tool

    Phylogibbs
    Regulatory sites in a collection of DNA sequences
      • Proteins & Proteomes
      • Software tool

    ScanProsite
    Protein sequences against PROSITE
      • Transcriptomics
      • Evolution & Phylogeny
      • Systems Biology
      • Database
      • Software tool

    SwissRegulon Portal
    Tools and data for regulatory genomics
      • Genomics
      • Software tool

    TASer
    Search tool associated to TASmania
      • Evolution & Phylogeny
      • Software tool

    raxmlGUI
    raxmlGUI 2.0 is a graphical user interface to RAxML
      • Metagenomics
      • Software tool

    mVIRs
    Prediction tool for inducible, bacteria-infecting viruses
      • Genomics
      • Evolution & Phylogeny
      • Software tool

    Nextclade
    Clade assignment, mutation calling & QC for virus sequences
      • Proteins & Proteomes
      • Software tool

    OMArk
    OMArk determines the quality and completeness of gene sets
      • Proteins & Proteomes
      • Evolution & Phylogeny
      • Software tool

    OMAmer
    Alignment-free protein subfamily assignment
      • Metagenomics
      • Software tool

    MAGFlow/BIgMAG
    Metagenome metrics and taxonomical annotation visualization
      • Genes & Genomes
      • Proteins & Proteomes
      • Software tool

    MetaGraph
    Petabase-scale sequence search