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- Proteins & Proteomes
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- Database
-
- Software tool
HAMAP
UniProtKB family classification and annotation
Structural Biology
SWISS-MODEL Repository
0 hit
Protein structure homology models
ModelArchive
Repository of predicted macromolecular structure models
SwissDock
Docking of small ligands into protein active sites
System Biology
MetaNetX
Metabolic network repository & analysis
Cellosaurus
Knowledge resource on cell lines
Genes & Genomes
Bgee
0 hit
Gene expression expertise
Evolution & Phylogeny
OMA
0 hit
Orthology inference among complete genomes
OrthoDB
0 hit
Ortholog evolutionary and functional annotations
Selectome
Database of positive selection
Proteins & Proteomes
PROSITE
0 hit
Protein family and domain database
STRING
0 hit
Protein-protein interaction networks and enrichment analysis
UniProtKB
Protein sequence database
ViralZone
0 hit
Fact sheets about viruses linked to sequence databases
ENZYME
Enzyme nomenclature database
HAMAP
0 hit
UniProtKB family classification and annotation
MyHits
Relationships between protein sequences and motifs
SwissLipids
0 hit
Knowledge resource for lipids
VenomZone
0 hit
Portal to venom protein UniProtKB entries
Protein Universe Atlas
0 hit
Interactive, annotated similarity network of all proteins
24 resources found for Workflows
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- Genomics
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- Population genetics
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- Software tool
V-pipe
Viral genomics pipeline-
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- Medicinal chemistry
- , Structural analysis
-
- Software tool
SwissParam
Topology and parameters for small molecules-
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- Genomics
-
- Software tool
ShoRAH
Analysis of NGS data-
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- Genes & Genomes
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- Evolution & Phylogeny
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- Software tool
REALPHY
Inference of phylogenetic trees from genome data-
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- Structural analysis
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- Software tool
OpenStructure
Molecular modelling and visualisation environment-
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- Genomics
-
- Evolution biology
-
- Software tool
Nextstrain
Impact of pathogen genome data on science and public health-
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- Proteins & Proteomes
-
- Software tool
MSight
Mass Spectrometry Imager-
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- Proteins & Proteomes
-
- Software tool
MELANIE
2-D PAGE analysis-
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- Proteins & Proteomes
-
- Software tool
HAMAP-Scan
Scanning of protein sequences against HAMAP families-
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- Genomics
- , Transcriptomics
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- Systems Biology
-
- Software tool
CRUNCH
Automated pipeline for ChIP-seq data analysis-
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- Proteins & Proteomes
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- Structural Biology
- , Structural analysis
-
- Software tool
SWISS-MODEL Workspace
Fully automated protein structure homology-modeling server-
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- Genomics
- , Transcriptomics
-
- Systems Biology
-
- Software tool
ISMARA
Webservice for gene expression and epigenetic data analysis-
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- Genomics
-
- Systems Biology
-
- Software tool
Phylogibbs
Regulatory sites in a collection of DNA sequences-
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- Genomics
-
- Population genetics
-
- Software tool
V-pipe SARS-CoV-2
V-pipe pipeline for SARS-CoV-2 sequencing data-
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- Metagenomics
-
- Software tool
LEMMI
Continuous benchmarking of methods for metagenomics-
-
- Proteins & Proteomes
-
- Database
HAMAP SPARQL endpoint
SPARQL access to the HAMAP annotation rules-
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- Transcriptomics
-
- Software tool
ASAP
Web-based, cooperative portal for single-cell data analyses-
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- Text mining & Machine learning
-
- Database
-
- Software tool
SIBiLS
Personalized information retrieval from the literature-
-
- Evolution & Phylogeny
-
- Software tool
raxmlGUI
raxmlGUI 2.0 is a graphical user interface to RAxML-
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- Genomics
-
- Evolution & Phylogeny
-
- Software tool
Nextclade
Clade assignment, mutation calling & QC for virus sequences-
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- Proteins & Proteomes
-
- Structural Biology
-
- Database
-
- Software tool
CAMEO
Weekly automated benchmarking of protein structure modelling-
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- Genes & Genomes
-
- Systems Biology
-
- Software tool
CREMA
Cis-Regulatory Element Motif Activities-
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- Transcriptomics
-
- Systems Biology
-
- Software tool
DWT-online
Dinucleotide Weight Tensor toolbox and visualisation service-