Expasy: Swiss Bioinformatics Resource Portal
e.g. BLAST, UniProt, MSH6, Albumin...

Structural Biology

SWISS-MODEL Repository

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Protein structure homology models

ModelArchive

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Repository of predicted macromolecular structure models

SwissDock

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Docking of small ligands into protein active sites

System Biology

MetaNetX

Metabolic network repository & analysis

Cellosaurus

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Knowledge resource on cell lines

Genes & Genomes

Bgee

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Gene expression expertise

Evolution & Phylogeny

OMA

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Orthology inference among complete genomes

OrthoDB

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Ortholog evolutionary and functional annotations

Selectome

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Database of positive selection

Proteins & Proteomes

PROSITE

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Protein family and domain database

STRING

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Protein-protein interaction networks and enrichment analysis

UniProtKB

4285 hits
Protein sequence database

ViralZone

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Fact sheets about viruses linked to sequence databases

ENZYME

Enzyme nomenclature database

HAMAP

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UniProtKB family classification and annotation

MyHits

Relationships between protein sequences and motifs

SwissLipids

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Knowledge resource for lipids

VenomZone

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Portal to venom protein UniProtKB entries

Protein Universe Atlas

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Interactive, annotated similarity network of all proteins

11 resources found for Machine learning

      • Proteins & Proteomes
      • Software tool

    Myristoylator

    N-terminal myristoylation of proteins by neural networks
      • Text mining & Machine learning
      • Software tool

    COVTriage

    Rank the COVID-19 literature according to COVoc ontology
      • Text mining & Machine learning
      • Database
      • Software tool

    SIBiLS

    Personalized information retrieval from the literature
      • Text mining & Machine learning
      • Software tool

    Variomes

    Search engine to support the curation of genomic variants
      • Proteins & Proteomes
      • Text mining & Machine learning
      • Database

    MHC Motif Atlas

    MHC Motif Atlas
      • Evolution biology
      • Software tool

    CAPTAIN

    Decision-support tool for conservation area prioritization
      • Genes & Genomes
      • , Genomics
      • Text mining & Machine learning
      • Database

    cancercelllines.org

    Genomic variants in human cancer cell lines
      • Text mining & Machine learning
      • Software tool

    BiotXplorer

    Biotic interactions from scientific publications
      • Text mining & Machine learning
      • Software tool

    Biodiversity PMC

    Search a large collection of scientific publications