Structural Biology

SWISS-MODEL Repository

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Protein structure homology models

ModelArchive

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Repository of predicted macromolecular structure models

SwissDock

Error while retrieving the hits
Docking of small ligands into protein active sites

System Biology

MetaNetX

Metabolic network repository & analysis

Cellosaurus

Knowledge resource on cell lines

Genes & Genomes

Bgee

Gene expression expertise

Evolution & Phylogeny

Orthology inference among complete genomes

OrthoDB

Ortholog evolutionary and functional annotations

Selectome

Database of positive selection

Proteins & Proteomes

PROSITE

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Protein family and domain database

STRING

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Protein-protein interaction networks and enrichment analysis

UniProtKB

Protein sequence database

ViralZone

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Fact sheets about viruses linked to sequence databases

ENZYME

Enzyme nomenclature database

HAMAP

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UniProtKB family classification and annotation

MyHits

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Relationships between protein sequences and motifs

SwissLipids

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Knowledge resource for lipids

VenomZone

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Portal to venom protein UniProtKB entries

Protein Universe Atlas

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Interactive, annotated similarity network of all proteins

6 resources found for GFF

      • Proteins & Proteomes
      • Database

    UniProtKB

    Protein sequence database
      • Transcriptomics
      • , Genomics
      • Systems Biology
      • Database

    SwissRegulon

    Database of genome-wide annotations of regulatory sites
      • Genomics
      • Software tool

    PACMAN

    Publication quality images of DNA locations
      • Genomics
      • , Genes & Genomes
      • Systems Biology
      • Database
      • Software tool

    iPtgxDBs

    Platform for integrated proteogenomics databases
      • Genomics
      • , Transcriptomics
      • Evolution biology
      • Software tool

    BUSCO

    From QC to gene prediction and phylogenomics