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- Genomics
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- Evolution biology
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- Database
Selectome
Database of positive selection
Structural Biology
Protein structure homology models
Repository of predicted macromolecular structure models
Docking of small ligands into protein active sites
System Biology
Metabolic network repository & analysis
Knowledge resource on cell lines
Genes & Genomes
Gene expression expertise
Evolution & Phylogeny
Orthology inference among complete genomes
Ortholog evolutionary and functional annotations
Database of positive selection
Proteins & Proteomes
Protein family and domain database
Protein-protein interaction networks and enrichment analysis
Protein sequence database
Knowledgebase on virus biology and viral proteins
Enzyme nomenclature database
Search results: database and tool description
30 resources found for evolution and phylogeny
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- Transcriptomics
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- Evolution biology
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- Database
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- Software tool
Bgee
Gene expression expertise -
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- Evolution & Phylogeny
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- Database
OrthoDB
Ortholog evolutionary and functional annotations -
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- Evolution & Phylogeny
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- Database
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- Software tool
OMA
Orthology inference among complete genomes -
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- Genomics
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- Population genetics
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- Software tool
V-pipe
Viral genomic variant detection pipeline -
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- Genomics
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- Software tool
ShoRAH
Analysis of NGS data -
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- Genes & Genomes
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- Evolution & Phylogeny
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- Software tool
REALPHY
Inference of phylogenetic trees from genome data -
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- Genomics
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- Evolution biology
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- Software tool
Nextstrain
Real-time tracking of pathogen evolution -
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- Genes & Genomes
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- Evolution biology
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- Software tool
GenomeHistory
Gene duplicate identification -
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- Genomics
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- Population genetics
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- Software tool
fastsimcoal
Fast sequential Markov coalescent simulation of genomic data -
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- Transcriptomics
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- Evolution biology
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- Software tool
BUSCO
From QC to gene prediction and phylogenomics -
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- Genomics
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- Evolution biology
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- Software tool
CT-CBN
Estimate conjunctive Bayesian networks -
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- Genes & Genomes
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- Evolution & Phylogeny
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- Database
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- Software tool
SwissOrthology
One-stop shop for orthologs -
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- Transcriptomics
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- Evolution & Phylogeny
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- Systems Biology
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- Database
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- Software tool
SwissRegulon Portal
Tools and data for regulatory genomics -
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- Evolution & Phylogeny
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- Database
OMA SPARQL endpoint
SPARQL access to the OMA Orthology database -
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- Transcriptomics
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- Evolution biology
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- Database
Bgee SPARQL endpoint
SPARQL access to the Bgee gene expression database -
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- Evolution & Phylogeny
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- Database
OrthoDB SPARQL endpoint
SPARQL access to the OrthoDB catalog of orthologs -
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- Evolution & Phylogeny
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- Software tool
OrthoLoger
Accurate and scalable inference of groups of orthologs -
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- Evolution & Phylogeny
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- Software tool
raxmlGUI
raxmlGUI 2.0 is a graphical user interface to RAxML -
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- Evolution & Phylogeny
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- Software tool
Phylo.io
A tool for visualising and comparing phylogenetic trees -
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- Evolution & Phylogeny
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- Database
SwissTree
A collection of gold standard gene phylogenies -
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- Genomics
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- Evolution & Phylogeny
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- Software tool
Nextclade
Clade assignment and quality control for viral genomes -
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- Evolution biology
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- Systems Biology
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- Text mining & Machine learning
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- Software tool
CAPTAIN
Decision-support tool for conservation area prioritization -
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- Genes & Genomes
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- Evolution biology
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- Software tool
BEAST2
Statistical framework for pathogen genome evolution analysis -
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- Genomics
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- Evolution biology
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- Software tool
GenSpectrum
Real-time pathogen genomic sequence analysis -
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- Genomics
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- Database
Pathoplexus
Human viral pathogen genomic data sharing platform -
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- Proteins & Proteomes
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- Evolution & Phylogeny
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- Software tool
OMAmer
Alignment-free protein subfamily assignment -
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- Evolution biology
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- Systems Biology
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- Database
MoultDB
Integrative resource on moulting in arthropods -
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- Genomics
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- Software tool
Loculus
Infrastructure for managing pathogen genomic data -
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- Evolution & Phylogeny
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- Structural Biology
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- Software tool
Foldtree
Phylogenetic tree from predicted protein structures -