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HAMAP annotation rule: MF_01630

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General rule information

Accession MF_01630
Dates 18-JAN-2006 (Created)
7-JUN-2008 (Last updated, Version 16)
Data class Protein
Predictors HAMAP; MF_01630; [distribution of match scores in UniProtKB];[seed alignment for MF_01630]


Propagated annotation

Identifier, protein and gene names
Identifier NAPA

case <Property:Membrane=1>
Protein name
RecName: Full=Nitrate reductase;
EC=1.7.99.4;
Flags: Precursor;
end case


case <Property:Membrane=2>
Protein name
RecName: Full=Periplasmic nitrate reductase;
EC=1.7.99.4;
Flags: Precursor;
end case

Gene name napA
Comments

case <Property:Membrane=1>
FUNCTION: Catalytic subunit of the nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein napC. Essential function for nitrate assimilation and may have a role in anaerobic metabolism (By similarity).
end case


case <Property:Membrane=2>
FUNCTION: Catalytic subunit of the periplasmic nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein napC, thus allowing electron flow between membrane and periplasm. Essential function for nitrate assimilation and may have a role in anaerobic metabolism (By similarity).
end case

CATALYTIC ACTIVITY: Nitrite + acceptor = nitrate + reduced acceptor.
COFACTOR: Binds 1 4Fe-4S cluster (By similarity).
COFACTOR: Binds 1 molybdenum ion per subunit (By similarity).
COFACTOR: Binds 2 molybdopterin guanine dinucleotide (MGD) groups per subunit (By similarity).
SUBUNIT: Interacts with napB (By similarity).

case <Property:Membrane=1>
SUBCELLULAR LOCATION: Secreted (Potential). Note=Membrane-associated (Potential).
end case


case <Property:Membrane=2>
SUBCELLULAR LOCATION: Periplasm (By similarity).
end case


case <Feature:PS51318>
PTM: Predicted to be exported by the Tat system. The position of the signal peptide cleavage has not been experimentally proven.
end case

SIMILARITY: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/napA/narB subfamily.
Cross-references
PROSITE PS00551; MOLYBDOPTERIN_PROK_1; 1;
PS00490; MOLYBDOPTERIN_PROK_2; 1;
PS00932; MOLYBDOPTERIN_PROK_3; 1;
PS51318; TAT; 0-1; trigger=PRU00648;
Pfam PF04879; Molybdop_Fe4S4; 1;
PF00384; Molybdopterin; 1;
PF01568; Molydop_binding; 1;
TIGRFAMs TIGR01706; NAPA; 1;
TIGR01409; TAT_signal_seq; 0-1;
case not <Feature:PS51318>
General Signal; -; 1; trigger=Yes;
end case

Keywords
4Fe-4S, Electron transport, Iron, Iron-sulfur, Metal-binding, Molybdenum, Nitrate assimilation, Oxidoreductase.

case <Property:Membrane=2>
Periplasm.
end case

Signal, Transport.
Gene Ontology
GO:0009055; Molecular function: electron carrier activity.
GO:0005506; Molecular function: iron ion binding.
GO:0008940; Molecular function: nitrate reductase activity.
GO:0006777; Biological process: Mo-molybdopterin cofactor biosynthetic process.
GO:0042128; Biological process: nitrate assimilation.
GO:0055114; Biological process: oxidation reduction.

case <Property:Membrane=2>
GO:0042597; Cellular component: periplasmic space.
end case

Features
From: NAPA_ECOLI (P33937)
Key     From     To       Description   Condition   FTGroup
METAL     46     46       Iron-sulfur (4Fe-4S) (By similarity)   C  
METAL     49     49       Iron-sulfur (4Fe-4S) (By similarity)   C  
METAL     53     53       Iron-sulfur (4Fe-4S) (By similarity)   C  
METAL     81     81       Iron-sulfur (4Fe-4S) (By similarity)   C  


Additional information

Size range: 754-937 amino acids
Related UniRules: None
Template: P33937 (NAPA_ECOLI)
Scope: Bacteria; Actinobacteria
Bacteria; Alphaproteobacteria
Bacteria; Betaproteobacteria
Bacteria; Deltaproteobacteria
Bacteria; Epsilonproteobacteria
Bacteria; Gammaproteobacteria
Fusion: Nter: None; Cter: None
Duplicate: in PHOPR
Plasmid encoded: in RALEU, RHIME, RHOS4

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UniProtKB rule member sequences



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