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HAMAP annotation rule: MF_01569

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General rule information

Accession MF_01569
Dates 18-AUG-2006 (Created)
7-JUN-2008 (Last updated, Version 8)
Data class Protein
Predictors HAMAP; MF_01569; [distribution of match scores in UniProtKB];[seed alignment for MF_01569]


Propagated annotation

Identifier, protein and gene names
Identifier SYP
Protein name
RecName: Full=Prolyl-tRNA synthetase;
EC=6.1.1.15;
AltName: Full=Proline--tRNA ligase;
Short=ProRS;
Gene name proS
Comments
FUNCTION: Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys-tRNA(Pro) is not edited by ProRS (By similarity).
CATALYTIC ACTIVITY: ATP + L-proline + tRNA(Pro) = AMP + diphosphate + L-prolyl-tRNA(Pro).
SUBUNIT: Homodimer (By similarity).
SUBCELLULAR LOCATION: Cytoplasm (By similarity).
DOMAIN: Consists of three domains: the N-terminal catalytic domain, the editing domain and the C-terminal anticodon-binding domain (By similarity).
SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 1 subfamily.
Cross-references
PROSITE PS50862; AA_TRNA_LIGASE_II; 1;
Pfam PF03129; HGTP_anticodon; 1;
PF00587; tRNA-synt_2b; 1;
PF04073; YbaK; 1;
PRINTS PR01046; TRNASYNTHPRO; 1;
TIGRFAMs TIGR00409; proS_fam_II; 1;
Keywords
Cytoplasm, Aminoacyl-tRNA synthetase, ATP-binding, Ligase, Nucleotide-binding, Protein biosynthesis.
Gene Ontology
GO:0005524; Molecular function: ATP binding.
GO:0004827; Molecular function: proline-tRNA ligase activity.
GO:0006433; Biological process: prolyl-tRNA aminoacylation.
GO:0005737; Cellular component: cytoplasm.


Additional information

Size range: 557-620 amino acids
Related UniRules: MF_01570 (SYP); MF_01571 (SYP)
Template: P16659 (SYP_ECOLI); O66690 (SYP_AQUAE): [Recover all]
Scope: Bacteria
Fusion: Nter: None; Cter: None
Duplicate: None
Plasmid encoded: None
Comments: Some species have a second copy of proS in another subfamily (MF_01571).

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UniProtKB rule member sequences



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