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HAMAP annotation rule: MF_01417

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General rule information

Accession MF_01417
Dates 5-MAR-2004 (Created)
4-MAY-2009 (Last updated, Version 16)
Data class Protein
Predictors HAMAP; MF_01417; [distribution of match scores in UniProtKB];[seed alignment for MF_01417]


Propagated annotation

Identifier, protein and gene names
Identifier SPEA
Protein name
RecName: Full=Biosynthetic arginine decarboxylase;
Short=ADC;
EC=4.1.1.19;
Gene name speA
Comments
FUNCTION: Catalyzes the biosynthesis of agmatine from arginine (By similarity).
CATALYTIC ACTIVITY: L-arginine = agmatine + CO(2).
COFACTOR: Magnesium (By similarity).
COFACTOR: Pyridoxal phosphate (By similarity).
PATHWAY: Amino-acid degradation; L-arginine degradation via ADC pathway; agmatine from L-arginine: step 1/1.
SIMILARITY: Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.
Cross-references
Pfam PF02784; Orn_Arg_deC_N; 1;
PF00278; Orn_DAP_Arg_deC; 1;
PRINTS PR01179; ODADCRBXLASE; 1;
TIGRFAMs TIGR01273; speA; 1;
PROSITE PS00878; ODR_DC_2_1; 1;
PS00879; ODR_DC_2_2; 1;
Keywords
Polyamine biosynthesis, Spermidine biosynthesis.

case <OC:Enterobacteriales> or <OC:Neisseriales>
Putrescine biosynthesis.
end case

Lyase, Decarboxylase, Pyridoxal phosphate, Metal-binding, Magnesium.
Gene Ontology
GO:0008792; Molecular function: arginine decarboxylase activity.

case <OC:Enterobacteriales> or <OC:Neisseriales>
GO:0009446; Biological process: putrescine biosynthetic process.
end case

GO:0008295; Biological process: spermidine biosynthetic process.
Features
From: SPEA_ECOLI (P21170)
Key     From     To       Description   Condition   FTGroup
REGION     307     317       Substrate-binding (Potential)   [FIVLC]-[DN]-[IV]-G-G-G-L-[GA]-[VI]-D-[YF]  
MOD_RES     127     127       N6-(pyridoxal phosphate)lysine (By similarity)   K  


Additional information

Size range: 626-695 amino acids
Related UniRules: None
Template: P21170 (SPEA_ECOLI)
Scope: Bacteria
Fusion: Nter: None; Cter: None
Duplicate: in SYNY3
Plasmid encoded: None

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UniProtKB rule member sequences



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