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HAMAP annotation rule: MF_01384

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General rule information

Accession MF_01384
Dates 8-MAY-2008 (Created)
4-JUL-2008 (Last updated, Version 6)
Data class Protein
Predictors HAMAP; MF_01384; [distribution of match scores in UniProtKB];[seed alignment for MF_01384]


Propagated annotation

Identifier, protein and gene names

case not <OC:Helicobacter>
Identifier URED
Protein name
RecName: Full=Urease accessory protein ureD;
Gene name ureD

else case <OC:Helicobacter>
Identifier UREH
Protein name
RecName: Full=Urease accessory protein ureH;
Gene name ureH
end case

Comments
FUNCTION: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter (By similarity).

case not <OC:Helicobacter>
SUBUNIT: UreD, ureF and ureG form a complex that acts as a GTP-hydrolysis-dependent molecular chaperone, activating the urease apoprotein by helping to assemble the nickel containing metallocenter of ureC. The ureE protein probably delivers the nickel (By similarity).

else case <OC:Helicobacter>
SUBUNIT: UreH, ureF and ureG form a complex that acts as a GTP-hydrolysis-dependent molecular chaperone, activating the urease apoprotein by helping to assemble the nickel containing metallocenter of ureC. The ureE protein probably delivers the nickel (By similarity).
end case

SUBCELLULAR LOCATION: Cytoplasm (By similarity).
SIMILARITY: Belongs to the ureD family.
Cross-references
Pfam PF01774; UreD; 1;
Keywords
Chaperone, Cytoplasm, Nickel insertion.
Gene Ontology
GO:0016151; Molecular function: nickel ion binding.
GO:0005737; Cellular component: cytoplasm.


Additional information

Size range: 240-329 amino acids
Related UniRules: None
Template: Q09063 (URED_KLEAE); P17089 (URED_PROMI); Q9ZFR5 (URED_YERPE): [Recover all]
Scope: Bacteria; Actinobacteria
Bacteria; Bacteroidetes
Bacteria; Chloroflexi
Bacteria; Cyanobacteria
Bacteria; Deinococcus-Thermus
Bacteria; Firmicutes
Bacteria; Proteobacteria
Bacteria; Magnetococcus
Bacteria; Verrucomicrobia
Archaea
Fusion: Nter: None; Cter: None
Duplicate: in BRASB, BRASO, BRUAB, BRUA2, BRUC2, BRUME, BRUO2, BRUSU, METEP, METPB, METRJ, OCHA4, PSESM, PSEU2, PSYCK, SACEN, STRGG, SYNJA
Plasmid encoded: in ECOLX, HALMA, METRJ
Comments: Called ureH in Helicobacter where ureD is an unrelated protein of the urease operon. Some E.coli EHEC strains are urease negative despite the presence of the operon in their genomes; in a few cases this has been shown to be due to nonsense mutations in ureD, for example ECO57. YERPE has a different nonsense mutation and is also non-functional. For some orally acquired pathogens (Brucella, Helicobacter, YERPE) urease acts as a virulence factor. In Brucella there are usually 2 urease operons.

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UniProtKB rule member sequences



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