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HAMAP annotation rule: MF_01161

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General rule information

Accession MF_01161
Dates 1-MAR-2005 (Created)
29-JUL-2008 (Last updated, Version 18)
Data class Protein
Predictors HAMAP; MF_01161; [distribution of match scores in UniProtKB];[seed alignment for MF_01161]


Propagated annotation

Identifier, protein and gene names
Identifier TILS

case not <OG:Chloroplast>
Protein name
RecName: Full=tRNA(Ile)-lysidine synthase;
EC=6.3.4.-;
AltName: Full=tRNA(Ile)-lysidine synthetase;
AltName: Full=tRNA(Ile)-2-lysyl-cytidine synthase;

else case <OG:Chloroplast>
Protein name
RecName: Full=tRNA(Ile)-lysidine synthase, chloroplastic;
EC=6.3.4.-;
AltName: Full=tRNA(Ile)-lysidine synthetase;
AltName: Full=tRNA(Ile)-2-lysyl-cytidine synthase;
end case

Gene name tilS
Comments
FUNCTION: Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine (By similarity).

case <OC:Bacteria>
SUBCELLULAR LOCATION: Cytoplasm (By similarity).

else case <OG:Chloroplast>
SUBCELLULAR LOCATION: Plastid, chloroplast.
end case


case <FT:1>
DOMAIN: The N-terminal region contains the highly conserved SGGXDS motif, predicted to be a P-loop motif involved in ATP binding.
end case

SIMILARITY: Belongs to the tRNA(Ile)-lysidine synthase family.
Cross-references
Pfam PF01171; ATP_bind_3; 1;
Keywords

case <FT:1>
ATP-binding, Nucleotide-binding.
end case


case <OC:Bacteria>
Cytoplasm.
end case

Ligase, tRNA processing.
Gene Ontology

case <FT:1>
GO:0005524; Molecular function: ATP binding.
end case

GO:0016879; Molecular function: ligase activity, forming carbon-nitrogen bonds.
GO:0006400; Biological process: tRNA modification.

case <OC:Bacteria>
GO:0005737; Cellular component: cytoplasm.

else case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case

Features
From: TILS_ECOLI (P52097)
Key     From     To       Description   Condition   FTGroup
NP_BIND     20     25       ATP (Potential)   S-G-G-x-D-S  


Additional information

Size range: 278-648 amino acids
Related UniRules: None
Template: P52097 (TILS_ECOLI)
Scope: Bacteria
Plastid
Fusion: Nter: None; Cter: <hprT>, <CMP/dCMP deaminase zinc-binding domain>
Duplicate: None
Plasmid encoded: None

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UniProtKB rule member sequences



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