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HAMAP annotation rule: MF_00557

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General rule information

Accession MF_00557
Dates 23-MAY-2002 (Created)
7-JUN-2008 (Last updated, Version 14)
Data class Protein
Predictors HAMAP; MF_00557; [distribution of match scores in UniProtKB];[seed alignment for MF_00557]


Propagated annotation

Identifier, protein and gene names
Identifier ALGL
Protein name
RecName: Full=Alginate lyase;
EC=4.2.2.3;
AltName: Full=Poly(beta-D-mannuronate) lyase;
AltName: Full=Poly(mana) alginate lyase;
Flags: Precursor;
Gene name algL
Comments
FUNCTION: Depolymerizes alginate by cleaving the beta-1,4 glycosidic bond (By similarity).
CATALYTIC ACTIVITY: Eliminative cleavage of polysaccharides containing beta-D-mannuronate residues to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enopyranuronosyl groups at their ends.

case <Property:Membrane=2>
SUBCELLULAR LOCATION: Periplasm (Potential).
end case

SIMILARITY: Belongs to the polysaccharide lyase 5 family.
Cross-references
General Signal; -; 1; trigger=Yes;
Keywords
Lyase, Signal.

case <Property:Membrane=2>
Periplasm.
end case

Gene Ontology
GO:0045135; Molecular function: poly(beta-D-mannuronate) lyase activity.
GO:0042122; Biological process: alginic acid catabolic process.

case <Property:Membrane=2>
GO:0042597; Cellular component: periplasmic space.
end case



Additional information

Size range: 367-378 amino acids
Related UniRules: None
Template: O50660 (ALGL_AZOCH); O52195 (ALGL_AZOVI); Q9L7P2 (ALGL_PSESY): [Recover all]
Scope: Bacteria
Fusion: Nter: None; Cter: None
Duplicate: None
Plasmid encoded: None

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UniProtKB rule member sequences



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