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HAMAP annotation rule: MF_00418

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General rule information

Accession MF_00418
Dates 19-JUN-2001 (Created)
7-JUN-2008 (Last updated, Version 29)
Data class Protein
Predictors HAMAP; MF_00418; [distribution of match scores in UniProtKB];[seed alignment for MF_00418]


Propagated annotation

Identifier, protein and gene names
Identifier DAPA
Protein name
RecName: Full=Dihydrodipicolinate synthase;
Short=DHDPS;
EC=4.2.1.52;
Gene name dapA
Comments
CATALYTIC ACTIVITY: L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H(2)O.
PATHWAY: Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; tetrahydrodipicolinate from L-aspartate: step 3/4.

case <OC:Bacteria>
SUBUNIT: Homotetramer (By similarity).
end case

SUBCELLULAR LOCATION: Cytoplasm (By similarity).
SIMILARITY: Belongs to the DHDPS family.
Cross-references
Pfam PF00701; DHDPS; 1;
PRINTS PR00146; DHPICSNTHASE; 1;
TIGRFAMs TIGR00674; dapA; 1;
PROSITE PS00665; DHDPS_1; 1;
PS00666; DHDPS_2; 1;
Keywords
Cytoplasm, Amino-acid biosynthesis, Diaminopimelate biosynthesis, Lyase, Lysine biosynthesis, Schiff base.
Gene Ontology
GO:0008840; Molecular function: dihydrodipicolinate synthase activity.
GO:0019877; Biological process: diaminopimelate biosynthetic process.
GO:0009085; Biological process: lysine biosynthetic process.
GO:0005737; Cellular component: cytoplasm.
Features
From: DAPA_ECOLI (P0A6L2)
Key     From     To       Description   Condition   FTGroup
REGION (Optional)     48     49       Pyruvate binding (By similarity)   [AGSTNPM]-[ANPSTG]   1
 
ACT_SITE     161     161       Schiff-base intermediate with substrate (By similarity)   K  
 
BINDING (Optional)     106     106       Pyruvate (By similarity)   Y   1
 
SITE     133     133       Involved in proton transfer during cleavage (By similarity)   Y  


Additional information

Size range: 283-311 amino acids
Related UniRules: MF_01237 (NANA (supersedes the current rule)); MF_00694 (KDGD)
Template: P0A6L2 (DAPA_ECOLI)
Scope: Bacteria
Archaea
Fusion: Nter: None; Cter: None
Duplicate: in BACHD, CLOAB, STRCO
Plasmid encoded: in RHIME

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UniProtKB rule member sequences



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