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HAMAP annotation rule: MF_00382

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General rule information

Accession MF_00382
Dates 1-JUN-2001 (Created)
3-NOV-2008 (Last updated, Version 27)
Data class Protein
Predictors HAMAP; MF_00382; [distribution of match scores in UniProtKB];[seed alignment for MF_00382]


Propagated annotation

Identifier, protein and gene names

case <OC:Bacteria> and not <OC:Cyanobacteria>
Identifier RL20
Protein name
RecName: Full=50S ribosomal protein L20;
Gene name rplT

else case <OC:Cyanobacteria>
Identifier RL20
Protein name
RecName: Full=50S ribosomal protein L20;
Gene name rplT, rpl20

else case <OG:Chloroplast>
Identifier RK20
Protein name
RecName: Full=50S ribosomal protein L20, chloroplastic;
Gene name rpl20
end case

Comments
FUNCTION: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity).

case <OG:Chloroplast>
SUBCELLULAR LOCATION: Plastid, chloroplast.
end case

SIMILARITY: Belongs to the ribosomal protein L20P family.
Cross-references
Pfam PF00453; Ribosomal_L20; 1;
PRINTS PR00062; RIBOSOMALL20; 1;
TIGRFAMs TIGR01032; rplT_bact; 1;
PROSITE PS00937; RIBOSOMAL_L20; 1;
Keywords
Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding.
Gene Ontology
GO:0019843; Molecular function: rRNA binding.
GO:0000027; Biological process: ribosomal large subunit assembly and maintenance.

case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case



Additional information

Size range: 110-139 amino acids
Related UniRules: None
Template: P0A7L3 (RL20_ECOLI); Q9RSW7 (RL20_DEIRA): [Recover all]
Scope: Bacteria
Plastid
Fusion: Nter: None; Cter: <Unknown>
Duplicate: None
Plasmid encoded: None
Comments: Fused with an unknown domain in ARTAT, ARTS2 and OENOB. AYWBP and ONYPE have an internal insert not taken into account in size range. CARRP is below the threshold and considered atypical.

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UniProtKB rule member sequences



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