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HAMAP annotation rule: MF_00374

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General rule information

Accession MF_00374
Dates 1-JUN-2001 (Created)
26-JUN-2008 (Last updated, Version 28)
Data class Protein

case <OC:Bacteria> or <OG:Chloroplast>
Predictors HAMAP; MF_00374_B; [distribution of match scores in UniProtKB];[seed alignment for MF_00374_B]
end case


case <OC:Archaea>
Predictors HAMAP; MF_00374_A; [distribution of match scores in UniProtKB];[seed alignment for MF_00374_A]
end case



Propagated annotation

Identifier, protein and gene names

case <OC:Bacteria> and not <OC:Cyanobacteria>
Identifier RL29
Protein name
RecName: Full=50S ribosomal protein L29;
Gene name rpmC

else case <OC:Cyanobacteria>
Identifier RL29
Protein name
RecName: Full=50S ribosomal protein L29;
Gene name rpmC, rpl29

else case <OC:Archaea>
Identifier RL29
Protein name
RecName: Full=50S ribosomal protein L29P;
Gene name rpl29p

else case <OG:Chloroplast>
Identifier RK29
Protein name
RecName: Full=50S ribosomal protein L29, chloroplastic;
Gene name rpl29
end case

Comments

case <OG:Chloroplast>
SUBCELLULAR LOCATION: Plastid, chloroplast.
end case

SIMILARITY: Belongs to the ribosomal protein L29P family.
Cross-references
Pfam PF00831; Ribosomal_L29; 1;
TIGRFAMs TIGR00012; L29; 1;
PROSITE PS00579; RIBOSOMAL_L29; 1;
Keywords
Ribonucleoprotein, Ribosomal protein.
Gene Ontology
GO:0006412; Biological process: translation.

case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case



Additional information


case <OC:Bacteria> or <OG:Chloroplast>
Size range: 60-94 amino acids
end case


case <OC:Archaea>
Size range: 63-77 amino acids
end case

Related UniRules: None
Template: P0A7M6 (RL29_ECOLI); Q9RXJ4 (RL29_DEIRA); Q5SHP6 (RL29_THET8); P10971 (RL29_HALMA): [Recover all]
Scope: Bacteria
Archaea
Plastid
Fusion: Nter: None; Cter: None
Duplicate: None
Plasmid encoded: None
Comments: Some bacterial L29 have very long C-terminal regions; these have been deleted from the alignment

View rule in raw text format (no links)



UniProtKB rule member sequences

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