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HAMAP annotation rule: MF_00324

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General rule information

Accession MF_00324
Dates 1-JUN-2001 (Created)
7-JUN-2008 (Last updated, Version 19)
Data class Protein
Predictors HAMAP; MF_00324; [distribution of match scores in UniProtKB];[seed alignment for MF_00324]


Propagated annotation

Identifier, protein and gene names
Identifier DP2L
Protein name
RecName: Full=DNA polymerase II large subunit;
Short=Pol II;
EC=2.7.7.7;
Gene name polC
Comments
FUNCTION: Possesses two activities: a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase (By similarity).
CATALYTIC ACTIVITY: Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).
CATALYTIC ACTIVITY: Degradation of single-stranded DNA. It acts progressively in a 3'- to 5'-direction, releasing nucleoside 5'-phosphates.
SUBUNIT: Heterodimer of a large subunit and a small subunit (By similarity).
SIMILARITY: Belongs to the archaeal DNA polymerase II family.
Cross-references
Pfam PF03833; PolC_DP2; 1;
TIGRFAMs TIGR00354; polC; 1;
Keywords
Transferase, Nucleotidyltransferase, DNA-directed DNA polymerase, DNA replication, Hydrolase, Nuclease, Exonuclease, DNA-binding, Multifunctional enzyme.
Gene Ontology
GO:0008408; Molecular function: 3'-5' exonuclease activity.
GO:0003677; Molecular function: DNA binding.
GO:0003887; Molecular function: DNA-directed DNA polymerase activity.
GO:0000738; Biological process: DNA catabolic process, exonucleolytic.
GO:0006261; Biological process: DNA-dependent DNA replication.


Additional information

Size range: 1080-1270 amino acids
Related UniRules: None
Template: Q59024 (DP2L_METJA); P81409 (DP2L_PYRFU): [Recover all]
Scope: Archaea
Fusion: Nter: None; Cter: None
Duplicate: None
Plasmid encoded: None
Comments: Inteins deleted in HALMA, HALWD, HALSA, METMJ, METHJ, PYRAB, PYRHO and PYRKO.

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UniProtKB rule member sequences



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