ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us HAMAP Swiss-Prot
Search for

HAMAP annotation rule: MF_00036

Send feedback new

General rule information

Accession MF_00036
Dates 1-JUN-2001 (Created)
25-SEP-2008 (Last updated, Version 28)
Data class Protein

case <OC:Bacteria>
Predictors HAMAP; MF_00036_B; [distribution of match scores in UniProtKB];[seed alignment for MF_00036_B]
end case


case <OC:Archaea>
Predictors HAMAP; MF_00036_A; [distribution of match scores in UniProtKB];[seed alignment for MF_00036_A]
end case



Propagated annotation

Identifier, protein and gene names
Identifier SYA
Protein name
RecName: Full=Alanyl-tRNA synthetase;
EC=6.1.1.7;
AltName: Full=Alanine--tRNA ligase;
Short=AlaRS;
Gene name alaS
Comments
CATALYTIC ACTIVITY: ATP + L-alanine + tRNA(Ala) = AMP + diphosphate + L-alanyl-tRNA(Ala).

case <FT:1>
COFACTOR: Binds 1 zinc ion per subunit (By similarity).
end case


case <OC:Enterobacteriaceae>
SUBUNIT: Homotetramer (By similarity).
end case

SUBCELLULAR LOCATION: Cytoplasm (By similarity).
SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
Cross-references
Pfam PF01411; tRNA-synt_2c; 1;
PRINTS PR00980; TRNASYNTHALA; 1;
TIGRFAMs TIGR00344; alaS; 1;
PROSITE PS50860; AA_TRNA_LIGASE_II_ALA; 1;
Keywords

case <FT:2>
Acetylation.
end case

Cytoplasm, Aminoacyl-tRNA synthetase, Protein biosynthesis, Ligase, ATP-binding, Nucleotide-binding.

case <FT:1>
Metal-binding, Zinc, Zinc-finger.
end case

Gene Ontology
GO:0004813; Molecular function: alanine-tRNA ligase activity.
GO:0005524; Molecular function: ATP binding.
GO:0006419; Biological process: alanyl-tRNA aminoacylation.

case <FT:1>
GO:0008270; Molecular function: zinc ion binding.
end case

GO:0005737; Cellular component: cytoplasm.
Features

case <OC:Bacteria>
From: SYA_ECOLI (P00957)
Key     From     To       Description   Condition   FTGroup
ZN_FING (Optional)     179     192       C2H2-type   C-x(2)-C-x(6)-H-x(2)-H  
end case

case <OC:Escherichia> or <OC:Shigella>
Key     From     To       Description   Condition   FTGroup
MOD_RES     74     74       N6-acetyllysine (By similarity)   K  
end case



Additional information


case <OC:Bacteria>
Size range: 593-966 amino acids
end case


case <OC:Archaea>
Size range: 870-932 amino acids
end case

Related UniRules: None
Template: P00957 (SYA_ECOLI)
Scope: Bacteria
Archaea
Fusion: Nter: None; Cter: None
Duplicate: in CLOPH
Plasmid encoded: None
Comments: Bad alignment with BURBU, BORGA, BORAP, BORHD, TREDE, TREPA and second copy of CLOPH (shorter sequences).

View rule in raw text format (no links)




UniProtKB rule member sequences



ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us HAMAP Swiss-Prot