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HAMAP annotation rule: MF_00022

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General rule information

Accession MF_00022
Dates 1-JUN-2001 (Created)
3-MAR-2009 (Last updated, Version 30)
Data class Protein

case <OC:Bacteria>
Predictors HAMAP; MF_00022_B; [distribution of match scores in UniProtKB];[seed alignment for MF_00022_B]
end case


case <OC:Archaea>
Predictors HAMAP; MF_00022_A; [distribution of match scores in UniProtKB];[seed alignment for MF_00022_A]
end case



Propagated annotation

Identifier, protein and gene names
Identifier SYE
Protein name
RecName: Full=Glutamyl-tRNA synthetase;
EC=6.1.1.17;
AltName: Full=Glutamate--tRNA ligase;
Short=GluRS;
Gene name gltX
Comments
FUNCTION: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) (By similarity).
CATALYTIC ACTIVITY: ATP + L-glutamate + tRNA(Glu) = AMP + diphosphate + L-glutamyl-tRNA(Glu).

case <OC:Bacteria> and <FTGroup:1>
COFACTOR: Binds 1 zinc ion per subunit (By similarity).
end case


case <OC:Bacteria>
SUBUNIT: Monomer (By similarity).
end case

SUBCELLULAR LOCATION: Cytoplasm (By similarity).
SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
Cross-references
Pfam PF00749; tRNA-synt_1c; 1;
case <OC:Archaea>
Pfam PF03950; tRNA-synt_1c_C; 1;
end case

PRINTS PR00987; TRNASYNTHGLU; 1;
TIGRFAMs TIGR00463; gltX_arch; 1;
TIGR00464; gltX_bact; 1;
PROSITE PS00178; AA_TRNA_LIGASE_I; 1;
Keywords
Aminoacyl-tRNA synthetase, ATP-binding, Cytoplasm, Ligase, Nucleotide-binding, Protein biosynthesis.

case <OC:Bacteria> and <FTGroup:1>
Metal-binding, Zinc.
end case

Gene Ontology
GO:0005524; Molecular function: ATP binding.
GO:0004818; Molecular function: glutamate-tRNA ligase activity.

case <OC:Bacteria> and <FTGroup:1>
GO:0008270; Molecular function: zinc ion binding.
end case

GO:0006424; Biological process: glutamyl-tRNA aminoacylation.
GO:0005737; Cellular component: cytoplasm.
Features

case <OC:Bacteria>
From: SYE_ECOLI (P04805)
Key     From     To       Description   Condition   FTGroup
MOTIF     9     19       "HIGH" region   P-[SN]-P-x(4)-[HR]-[LIVMAT]-[GE]-x  
MOTIF     237     241       "KMSKS" region   x-[LIMSF]-S-K-[KR]  
 
METAL (Optional)     98     98       Zinc (By similarity)   C   1
METAL (Optional)     100     100       Zinc (By similarity)   C   1
METAL (Optional)     125     125       Zinc (By similarity)   [CH]   1
METAL (Optional)     127     127       Zinc (By similarity)   [HED]   1
 
BINDING     240     240       ATP (By similarity)   K  
end case

case <OC:Archaea>
From: SYE_METJA (Q58772)
Key     From     To       Description   Condition   FTGroup
MOTIF     98     108       "HIGH" region   P-[SNE]-P-x(4)-[HTS]-[LIVM]-G-x  
end case



Additional information


case <OC:Bacteria>
Size range: 431-546 amino acids
end case


case <OC:Archaea>
Size range: 548-588 amino acids
end case

Related UniRules: MF_01428 (GLUQ)
Template: P04805 (SYE_ECOLI); O25360 (SYE2_HELPY); P27000 (SYE_THET8); Q8DLI5 (SYE_THEEB): [Recover all]
Scope: Bacteria
Archaea
Fusion: Nter: None; Cter: <Unknown>
Duplicate: in ACIBL, ACICJ, ACIF5, ALHEH, ANAMM, ANAPZ, ARCB4, BARBK, BARHE, BARQU, BART1, BEII9, BRUA1, BRUA2, BRUAB, BRUC2, BRUME, BRUO2, BRUSI, BRUSU, CALS8, CAMC1, CAMC5, CAMFF, CAMHC, CAMJ8, CAMJD, CAMJE, CAMJJ, CAMJR, COXB1, COXB2, COXBN, COXBR, COXBU, DINSH, EHRCJ, EHRCR, EHRRG, EHRRW, ERYLH, FERNB, GLUDA, GLUOX, GRABC, HALHL, HELAH, HELHP, HELP2, HELPG, HELPH, HELPJ, HELPS, HELPY, HYPNA, JANSC, LACBA, MAGMM, MARMM, MESSB, METCA, METEP, METPB, METRJ, METS4, NEOSM, NITOC, NITSB, NOVAD, OCHA4, ORITB, ORITI, PARDP, PARL1, PETMO, RHILO, RHOCS, RHORT, RHOS1, RHOS4, RHOS5, RICAH, RICB8, RICBR, RICCK, RICCN, RICFE, RICM5, RICPR, RICRO, RICRS, RICTY, ROSDO, RUBXD, SILPO, SILST, SPHAL, SPHWW, SULDN, SULNB, SYNAS, SYNWW, THELT, THEM4, THEMA, THEP1, THEP3, THEPX, THESQ, THETN, WOLPM, WOLPP, WOLSU, WOLTR, XANP2, ZYMMO
Plasmid encoded: None

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UniProtKB rule member sequences



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