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HAMAP annotation rule: MF_01345

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General rule information

Accession MF_01345
Dates 20-MAR-2006 (Created)
25-NOV-2009 (Last updated, Version 16)
Data class Protein

case <OC:Bacteria> or <OG:Chloroplast>
Predictors HAMAP; MF_01345_B; [distribution of match scores in UniProtKB];[seed alignment for MF_01345_B]
end case


case <OC:Archaea>
Predictors HAMAP; MF_01345_A; [distribution of match scores in UniProtKB];[seed alignment for MF_01345_A]
end case

Names Ribosomal_S17


Propagated annotation

Identifier, protein and gene names

case <OC:Bacteria> and not <OC:Cyanobacteria>
Identifier RS17
Protein name
RecName: Full=30S ribosomal protein S17;
Gene name rpsQ

else case <OC:Cyanobacteria>
Identifier RS17
Protein name
RecName: Full=30S ribosomal protein S17;
Gene name rpsQ, rps17

else case <OC:Archaea>
Identifier RS17
Protein name
RecName: Full=30S ribosomal protein S17P;
Gene name rps17p

else case <OG:Chloroplast>
Identifier RR17
Protein name
RecName: Full=30S ribosomal protein S17, chloroplastic;
Gene name rps17
end case

Comments
FUNCTION: One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA (By similarity).
SUBUNIT: Part of the 30S ribosomal subunit (By similarity).

case <OG:Chloroplast>
SUBCELLULAR LOCATION: Plastid, chloroplast.
end case

SIMILARITY: Belongs to the ribosomal protein S17P family.
Cross-references
PROSITE PS00056; RIBOSOMAL_S17; 1;
Pfam PF00366; Ribosomal_S17; 1;
PRINTS PR00973; RIBOSOMALS17; 1;
Keywords
Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding.
Gene Ontology
GO:0019843; Molecular function: rRNA binding.
GO:0006412; Biological process: translation.

case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case



Additional information


case <OC:Bacteria>
Size range: 76-138 amino acids
end case


case <OC:Archaea>
Size range: 106-123 amino acids
end case

Related UniRules: None
Template: P0AG63 (RS17_ECOLI); Q5SHP7 (RS17_THET8): [Recover all]
Scope: Bacteria
Archaea
Plastid
Fusion: Nter: None; Cter: <Unknown>
Duplicate: in BACTN, METAC
Plasmid encoded: None
Comments: Second copy fused to an unknown domain in METAC.

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UniProtKB rule member sequences