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HAMAP annotation rule: MF_01343

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General rule information

Accession MF_01343
Dates 6-DEC-2005 (Created)
25-NOV-2009 (Last updated, Version 14)
Data class Protein

case <OC:Bacteria> or <OG:Chloroplast>
Predictors HAMAP; MF_01343_B; [distribution of match scores in UniProtKB];[seed alignment for MF_01343_B]
end case


case <OC:Archaea>
Predictors HAMAP; MF_01343_A; [distribution of match scores in UniProtKB];[seed alignment for MF_01343_A]
end case

Names Ribosomal_S15_S13e


Propagated annotation

Identifier, protein and gene names

case <OC:Bacteria> and not <OC:Cyanobacteria>
Identifier RS15
Protein name
RecName: Full=30S ribosomal protein S15;
Gene name rpsO

else case <OC:Cyanobacteria>
Identifier RS15
Protein name
RecName: Full=30S ribosomal protein S15;
Gene name rpsO, rps15

else case <OC:Archaea>
Identifier RS15
Protein name
RecName: Full=30S ribosomal protein S15P/S13e;
Gene name rps15p

else case <OG:Chloroplast>
Identifier RR15
Protein name
RecName: Full=30S ribosomal protein S15, chloroplastic;
Gene name rps15
end case

Comments

case <OC:Bacteria>
FUNCTION: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA (By similarity).
FUNCTION: Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome (By similarity).
SUBUNIT: Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA (By similarity).

else case <OC:Archaea>
SUBUNIT: Part of the 30S ribosomal subunit (By similarity).

else case <OG:Chloroplast>
SUBUNIT: Part of the 30S ribosomal subunit (By similarity).
SUBCELLULAR LOCATION: Plastid, chloroplast.
end case

SIMILARITY: Belongs to the ribosomal protein S15P family.
Cross-references
PROSITE PS00362; RIBOSOMAL_S15; 1;
Pfam PF00312; Ribosomal_S15; 1;
PF08069; Ribosomal_S13_N; 1;
TIGRFAMs TIGR00952; S15_bact; 1;
Keywords
Ribonucleoprotein, Ribosomal protein.

case <OC:Bacteria>
RNA-binding, rRNA-binding.
end case

Gene Ontology

case <OC:Bacteria>
GO:0019843; Molecular function: rRNA binding.
end case

GO:0006412; Biological process: translation.

case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case



Additional information


case <OC:Bacteria>
Size range: 78-113 amino acids
end case


case <OC:Archaea>
Size range: 132-170 amino acids
end case

Related UniRules: None
Template: Q5SJ76 (RS15_THET8); P0ADZ4 (RS15_ECOLI); P05766 (RS15_BACST); P80378 (RS15_THETH): [Recover all]
Scope: Bacteria
Archaea
Plastid
Fusion: Nter: None; Cter: None
Duplicate: in HAEIN
Plasmid encoded: None
Comments: Sometimes duplicated in (mostly) monocot plastids.

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UniProtKB rule member sequences