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HAMAP annotation rule: MF_01337

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General rule information

Accession MF_01337
Dates 22-JUL-2005 (Created)
25-NOV-2009 (Last updated, Version 11)
Data class Protein

case <OC:Bacteria> or <OG:Chloroplast>
Predictors HAMAP; MF_01337_B; [distribution of match scores in UniProtKB];[seed alignment for MF_01337_B]
end case


case <OC:Archaea>
Predictors HAMAP; MF_01337_A; [distribution of match scores in UniProtKB];[seed alignment for MF_01337_A]
end case

Names Ribosomal_L18


Propagated annotation

Identifier, protein and gene names

case <OC:Bacteria> and not <OC:Cyanobacteria>
Identifier RL18
Protein name
RecName: Full=50S ribosomal protein L18;
Gene name rplR

else case <OC:Cyanobacteria>
Identifier RL18
Protein name
RecName: Full=50S ribosomal protein L18;
Gene name rplR, rpl18

else case <OC:Archaea>
Identifier RL18
Protein name
RecName: Full=50S ribosomal protein L18P;
Gene name rpl18p

else case <OG:Chloroplast>
Identifier RK18
Protein name
RecName: Full=50S ribosomal protein L18, chloroplastic;
Gene name rpl18
end case

Comments

case <OC:Bacteria>
FUNCTION: This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (By similarity).
SUBUNIT: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs (By similarity).

else case <OC:Archaea>
FUNCTION: This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (By similarity).
SUBUNIT: Part of the 50S ribosomal subunit. Contacts the 5S and 23S rRNAs (By similarity).

else case <OG:Chloroplast>
FUNCTION: Binds 5S rRNA, forms part of the central protuberance of the 50S subunit (By similarity).
SUBUNIT: Part of the 50S ribosomal subunit; contacts the 5S rRNA (By similarity).
SUBCELLULAR LOCATION: Plastid, chloroplast.
end case

SIMILARITY: Belongs to the ribosomal protein L18P family.
Cross-references
Pfam PF00861; Ribosomal_L18p; 1;
PRINTS PR00058; RIBOSOMALL5; 1;
TIGRFAMs TIGR00060; L18_bact; 1;
Keywords
Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding.
Gene Ontology
GO:0019843; Molecular function: rRNA binding.
GO:0006412; Biological process: translation.

case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case



Additional information


case <OC:Bacteria>
Size range: 105-135 amino acids
end case


case <OC:Archaea>
Size range: 158-214 amino acids
end case

Related UniRules: None
Template: P09415 (RL18_BACST); Q9RSL2 (RL18_DEIRA); P0C018 (RL18_ECOLI); Q5SHQ4 (RL18_THET8); P14123 (RL18_HALMA): [Recover all]
Scope: Bacteria
Archaea
Plastid
Fusion: Nter: None; Cter: None
Duplicate: None
Plasmid encoded: None

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UniProtKB rule member sequences