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UniProtKB/Swiss-Prot entry P11071


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ACEK_ECOLI
Primary accession number P11071
Secondary accession numbers P11070 Q2M6T8
Integrated into Swiss-Prot on July 1, 1989
Sequence was last modified on December 1, 2000 (Sequence version 2)
Annotations were last modified on    September 23, 2008 (Entry version 80)
Name and origin of the protein
Protein name Isocitrate dehydrogenase kinase/phosphatase
Synonyms IDH kinase/phosphatase
IDHK/P
EC 2.7.11.5
EC 3.1.3.-
Gene name
Name: aceK
OrderedLocusNames: b4016, JW3976
From
Escherichia coli (strain K12) [TaxID: 83333] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PARTIAL PROTEIN SEQUENCE.
PubMed=2836370 [NCBI, ExPASy, EBI, Israel, Japan]
Klumpp D.J., Plank D.W., Bowdin L.J., Stueland C.S., Chung T., Laporte D.C.;
"Nucleotide sequence of aceK, the gene encoding isocitrate dehydrogenase kinase/phosphatase.";
J. Bacteriol. 170:2763-2769(1988).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=2826408 [NCBI, ExPASy, EBI, Israel, Japan]
Cortay J.-C., Bleicher F., Rieul C., Reeves H.C., Cozzone A.J.;
"Nucleotide sequence and expression of the aceK gene coding for isocitrate dehydrogenase kinase/phosphatase in Escherichia coli.";
J. Bacteriol. 170:89-97(1988).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / MG1655 / ATCC 47076;
DOI=10.1093/nar/21.23.5408; PubMed=8265357 [NCBI, ExPASy, EBI, Israel, Japan]
Blattner F.R., Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L.;
"Analysis of the Escherichia coli genome. IV. DNA sequence of the region from 89.2 to 92.8 minutes.";
Nucleic Acids Res. 21:5408-5417(1993).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / MG1655 / ATCC 47076;
DOI=10.1126/science.277.5331.1453; PubMed=9278503 [NCBI, ExPASy, EBI, Israel, Japan]
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.;
"The complete genome sequence of Escherichia coli K-12.";
Science 277:1453-1474(1997).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
DOI=10.1038/msb4100049; PubMed=16738553 [NCBI, ExPASy, EBI, Israel, Japan]
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.";
Mol. Syst. Biol. 2:E1-E5(2006).
[6]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-55.
PubMed=3049537 [NCBI, ExPASy, EBI, Israel, Japan]
Matsuoka M., McFadden B.A.;
"Isolation, hyperexpression, and sequencing of the aceA gene encoding isocitrate lyase in Escherichia coli.";
J. Bacteriol. 170:4528-4536(1988).
[7]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 552-578.
DOI=10.1016/0378-1119(91)90024-6; PubMed=1995429 [NCBI, ExPASy, EBI, Israel, Japan]
Galinier A., Bleicher F., Negre D., Perriere G., Duclos B., Cozzone A.J., Cortay J.-C.;
"Primary structure of the intergenic region between aceK and iclR in the Escherichia coli chromosome.";
Gene 97:149-150(1991).
[8]
REVIEW, AND MUTAGENESIS OF LYS-336.
DOI=10.1016/0300-9084(89)90110-7; PubMed=2557093 [NCBI, ExPASy, EBI, Israel, Japan]
Laporte D.C., Stueland C.S., Ikeda T.P.;
"Isocitrate dehydrogenase kinase/phosphatase.";
Biochimie 71:1051-1057(1989).
[9]
MUTAGENESIS OF ASP-371; ASN-377; ASP-403 AND GLU-439.
DOI=10.1021/bi001713x; PubMed=11258918 [NCBI, ExPASy, EBI, Israel, Japan]
Oudot C., Cortay J.-C., Blanchet C., Laporte D.C., Di Pietro A., Cozzone A.J., Jault J.-M.;
"The 'catalytic' triad of isocitrate dehydrogenase kinase/phosphatase from E. coli and its relationship with that found in eukaryotic protein kinases.";
Biochemistry 40:3047-3055(2001).
Comments
  • FUNCTION: Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation.
  • CATALYTIC ACTIVITY: ATP + [isocitrate dehydrogenase (NADP+)] = ADP + [isocitrate dehydrogenase (NADP+)] phosphate.
  • SUBCELLULAR LOCATION: Cytoplasm.
  • SIMILARITY: Belongs to the aceK family.
  • SEQUENCE CAUTION:
    • Sequence=AAA24007.1; Type=Frameshift; Positions=92, 137, 166;
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M20714; AAA24010.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M18974; AAA24007.1; ALT_FRAME; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U00006; AAC43110.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U00096; AAC76986.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP009048; BAE78018.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M22621; AAC13651.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M63497; AAA73005.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR G65208; KIECID.
RefSeq AP_004517.1; -.
NP_418440.1; -.
3D structure databases
ModBase P11071.
Protein-protein interaction databases
IntAct P11071; -.
Protein family/group databases
PptaseDB P3D0409136; -.
Enzyme and pathway databases
BioCyc EcoCyc:ICITDEHASE-KIN-PHOSPHA; -.
MetaCyc:ICITDEHASE-KIN-PHOSPHA; -.
Organism-specific databases
EchoBASE EB0025; -.
EcoGene EG10026; aceK.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0008772; Molecular function: [isocitrate dehydrogenase (NADP+)] kinase activity (inferred from electronic annotation from HAMAP).
GO:0005524; Molecular function: ATP binding (inferred from electronic annotation from HAMAP).
GO:0006097; Biological process: glyoxylate cycle (inferred from electronic annotation from HAMAP).
GO:0006099; Biological process: tricarboxylic acid cycle (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00747; -; 1.
PBIL [Tree]
InterPro IPR010452; IsoCit_DHase_AceK.
Graphical view of domain structure.
Pfam PF06315; AceK; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000719; AceK; 1.
BLOCKS P11071.
Genome annotation databases
GeneID 944797; -.
GenomeReviews U00096_GR; b4016.
AP009048_GR; JW3976.
KEGG ecj:JW3976; -.
eco:b4016; -.
Phylogenomic databases
HOGENOM P11071; -.
Genome annotation databases
CMR P11071; b4016.
Other
ProtoNet P11071.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
ATP-binding; Complete proteome; Cytoplasm; Direct protein sequencing; Glyoxylate bypass; Hydrolase; Kinase; Nucleotide-binding; Protein phosphatase; Transferase; Tricarboxylic acid cycle.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   578  578     Isocitrate dehydrogenase kinase/phosphatase. PRO_0000057898
NP_BIND   315   321  7     ATP (By similarity). 
ACT_SITE   371   371        Probable. 
BINDING   336   336        ATP (By similarity). 
MUTAGEN   336   336        K->M: Inhibits enzyme. 
MUTAGEN   371   371        D->A,E,Q: Loss of activity. 
MUTAGEN   377   377        N->A: No loss of activity. 
MUTAGEN   403   403        D->A: No loss of activity. 
MUTAGEN   439   439        E->A: No loss of activity. 
CONFLICT   140   140        A -> G (in Ref. 2; AAA24007). 
CONFLICT   416   417        ER -> DG (in Ref. 1; AAA24010). 
Sequence information
Length: 578 AA [This is the length of the unprocessed precursor] Molecular weight: 67699 Da [This is the MW of the unprocessed precursor] CRC64: 5ABD5FB5FA1D9B29 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MPRGLELLIA QTILQGFDAQ YGRFLEVTSG AQQRFEQADW HAVQQAMKNR IHLYDHHVGL 

        70         80         90        100        110        120 
VVEQLRCITN GQSTDAAFLL RVKEHYTRLL PDYPRFEIAE SFFNSVYCRL FDHRSLTPER 

       130        140        150        160        170        180 
LFIFSSQPER RFRTIPRPLA KDFHPDHGWE SLLMRVISDL PLRLRWQNKS RDIHYIIRHL 

       190        200        210        220        230        240 
TETLGTDNLA ESHLQVANEL FYRNKAAWLV GKLITPSGTL PFLLPIHQTD DGELFIDTCL 

       250        260        270        280        290        300 
TTTAEASIVF GFARSYFMVY APLPAALVEW LREILPGKTT AELYMAIGCQ KHAKTESYRE 

       310        320        330        340        350        360 
YLVYLQGCNE QFIEAPGIRG MVMLVFTLPG FDRVFKVIKD RFAPQKEMSA AHVRACYQLV 

       370        380        390        400        410        420 
KEHDRVGRMA DTQEFENFVL EKRHISPALM ELLLQEAAEK ITDLGEQIVI RHLYIERRMV 

       430        440        450        460        470        480 
PLNIWLEQVE GQQLRDAIEE YGNAIRQLAA ANIFPGDMLF KNFGVTRHGR VVFYDYDEIC 

       490        500        510        520        530        540 
YMTEVNFRDI PPPRYPEDEL ASEPWYSVSP GDVFPEEFRH WLCADPRIGP LFEEMHADLF 

       550        560        570 
RADYWRALQN RIREGHVEDV YAYRRRQRFS VRYGEMLF 

P11071 in FASTA format

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