Sulfinator

  • Proteins & Proteomes
  • Software tool
The Sulfinator is a software tool able to predict tyrosine sulfation sites in protein sequences. It employs four different Hidden Markov Models that were built to recognise sulfated tyrosine residues located N-terminally, within sequence windows of more than 25 amino acids and C-terminally, as well as sulfated tyrosines clustered within 25 amino acid windows, respectively. All four HMMs contain the distilled information from one multiple sequence alignment.

You might also be interested in

      • Glycomics
      • Database

    UniCarb-DB

    Glycan structures and associated mass spectrometry data
      • Glycomics
      • Proteins & Proteomes
      • Software tool

    Swiss Mass Abacus

    Intuitive calculator of peptide and glycopeptide masses
      • Glycomics
      • Software tool

    SugarSketcher

    Fast, intuitive, SNFG-compliant glycan structure drawing
      • Glycomics
      • Database

    SugarBind

    Pathogen Sugar-Binding Database
      • Glycomics
      • Software tool

    GlyS3

    Match a glycan substructure to a database of full structures
      • Glycomics
      • Software tool

    Glynsight

    Visualise and compare glycan expression profiles
      • Glycomics
      • Proteins & Proteomes
      • Software tool

    GlycoSiteAlign

    Multiple alignment of sequences around glycosylation sites
      • Glycomics
      • Proteins & Proteomes
      • Database

    GlyConnect

    Integrated data platform to study glycosylation
      • Glycomics
      • Software tool

    GlycoDigest

    In silico digestion of glycans by exoglycosidases
      • Proteins & Proteomes
      • Software tool

    PeptideMass

    Theoretical protein cleavage by a given enzyme
      • Proteins & Proteomes
      • Software tool

    Myristoylator

    N-terminal myristoylation of proteins by neural networks
      • Glycomics
      • Proteins & Proteomes
      • Software tool

    GlycoMod

    Possible oligosaccharide structures on proteins from masses
      • Proteins & Proteomes
      • Software tool

    FindPept

    Unspecific protein cleavage from experimental masses
      • Proteins & Proteomes
      • Software tool

    FindMod

    Potential PTMs and single amino acid substitutions
      • Glycomics
      • Proteins & Proteomes
      • Software tool

    MzJava

    Open source Java class library to process MS fragmentation
      • Glycomics
      • Proteins & Proteomes
      • Database

    Glyco@Expasy

    Zooming in on web-based glycoinformatics resources