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- Glycomics
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- Proteins & Proteomes
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- Software tool
GlycoSiteAlign
Multiple alignment of sequences around glycosylation sites
PRATT
- Proteins & Proteomes
- Software tool
An important problem in sequence analysis is to find patterns matching sets or subsets of sequences. This tool allows the user to discover patterns conserved in sets of unaligned protein sequences. The user can specify what kind of patterns should be searched for, and how many sequences should match a pattern to be reported. The patterns are reported using PROSITE syntax.
You might also be interested in
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- Glycomics
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- Proteins & Proteomes
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- Database
GlyConnect
Integrated data platform to study glycosylation-
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- Proteins & Proteomes
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- Database
UniProtKB/Swiss-Prot
Protein knowledgebase-
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- Proteins & Proteomes
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- Database
UniProtKB
Protein sequence database-
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- Proteins & Proteomes
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- Software tool
HAMAP-Scan
Scanning of protein sequences against HAMAP families-
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- Proteins & Proteomes
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- Database
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- Software tool
HAMAP
UniProtKB family classification and annotation-
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- Proteins & Proteomes
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- Database
UniProt SPARQL endpoint
SPARQL access to UniProt and related data-
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- Proteins & Proteomes
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- Database
HAMAP SPARQL endpoint
SPARQL access to the HAMAP annotation rules-
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- Proteins & Proteomes
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- Database
PROSITE
Protein family and domain database-
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- Proteins & Proteomes
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- Software tool
ScanProsite
Protein sequences against PROSITE-
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- Proteins & Proteomes
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- Glycomics
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- Database
GlyConnect SPARQL endpoint
SPARQL access to GlyConnect-
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- Proteins & Proteomes
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- Text mining & Machine learning
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- Database
MHC Motif Atlas
MHC Motif Atlas-
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- Glycomics
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- Proteins & Proteomes
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- Database
Glyco@Expasy
Zooming in on web-based glycoinformatics resources-