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HPI
The UniProtKB/Swiss-Prot Human Proteome Initiative |
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HPI Status report
UniProtKB/Swiss-Prot Release 57.3 of 26-May-2009: 470369 entries
(Release statistics)
Total number of manually annotated mammalian entries in UniProtKB/Swiss-Prot: 64,541
Total number of manually annotated HUMAN entries in UniProtKB/Swiss-Prot: 20,330
| Annotation categories |
counts [total / unique] |
max per entry |
average per entry |
number of entries |
coverage |
| Additional isoforms due to alternative splicing, initiation or promoter usage: |
14,179 |
34 |
0.70 |
7,424 |
36% |
| Variants (disease mutations and polymorphisms): |
57,491 |
1363 |
2.83 |
11,716 |
57% |
| Post-translational modifications (experimentally proven or potential): |
67,984 |
303 |
3.34 |
12,017 |
59% |
| References to published articles: |
116,470 / 46,906 |
180 |
5.73 |
20,200 |
99% |
| Comment blocks: |
114,590 / 41,791 |
34 |
5.64 |
19,707 |
96% |
| Feature lines: |
523,946 |
4258 |
25.77 |
20,330 |
100% |
| Cross-references: |
| EMBL protein_ids: |
138,079 / 137,290 |
723 |
6.79 |
20,206 |
99% |
| InterPro: |
55,091 / 7,305 |
22 |
2.71 |
17,190 |
84% |
| PDB (3D-structures): |
31,862 / 29,878 |
516 |
1.57 |
3,740 |
18% |
| MIM catalog of human genes and genetic disorders: |
15,699 / 14,789 |
14 |
0.77 |
12,391 |
60% |
| HGNC gene nomenclature: |
19,432 / 19,293 |
14 |
0.96 |
19,262 |
94% |
Total number of manually annotated MOUSE entries in UniProtKB/Swiss-Prot: 16,140
| Annotation categories |
counts [total / unique] |
max per entry |
average per entry |
number of entries |
coverage |
| Additional isoforms due to alternative splicing, initiation or promoter usage: |
7,415 |
20 |
0.46 |
4,389 |
27% |
| Variants (disease mutations and polymorphisms): |
1,165 |
37 |
0.07 |
358 |
2% |
| Post-translational modifications (experimentally proven or potential): |
56,288 |
216 |
3.49 |
10,260 |
63% |
| References to published articles: |
48,986 / 17,875 |
50 |
3.04 |
15,903 |
98% |
| Comment blocks: |
82,498 / 33,121 |
22 |
5.11 |
15,811 |
97% |
| Feature lines: |
258,973 |
612 |
16.05 |
16,140 |
100% |
| Cross-references: |
| EMBL protein_ids: |
69,681 / 69,628 |
111 |
4.32 |
16,003 |
99% |
| InterPro: |
46,039 / 7,132 |
20 |
2.85 |
14,393 |
89% |
| PDB (3D-structures): |
5,346 / 4,966 |
300 |
0.33 |
970 |
6% |
| Mouse Genome Informatics: |
15,986 / 15,921 |
12 |
0.99 |
15,935 |
98% |
Total number of manually annotated RAT entries in UniProtKB/Swiss-Prot: 7,384
| Annotation categories |
counts [total / unique] |
max per entry |
average per entry |
number of entries |
coverage |
| Additional isoforms due to alternative splicing, initiation or promoter usage: |
1,407 |
18 |
0.19 |
799 |
10% |
| Variants (disease mutations and polymorphisms): |
274 |
30 |
0.04 |
115 |
1% |
| Post-translational modifications (experimentally proven or potential): |
28,167 |
204 |
3.81 |
5,152 |
69% |
| References to published articles: |
15,376 / 9,442 |
26 |
2.08 |
6,956 |
94% |
| Comment blocks: |
38,238 / 18,272 |
24 |
5.18 |
7,267 |
98% |
| Feature lines: |
112,158 |
314 |
15.19 |
7,384 |
100% |
| Cross-references: |
| EMBL protein_ids: |
15,092 / 15,077 |
152 |
2.04 |
7,309 |
98% |
| InterPro: |
22,279 / 5,197 |
20 |
3.02 |
6,748 |
91% |
| PDB (3D-structures): |
3,018 / 2,875 |
136 |
0.41 |
422 |
5% |
| Rat Genome Database: |
7,270 / 7,250 |
3 |
0.98 |
7,266 |
98% |
For more detailed information about the taxonomic distribution of UniProtKB/Swiss-Prot
entries, see the corresponding section in the Release
statistics.
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