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HAMAP
High-quality Automated and Manual Annotation of microbial Proteomes

HAMAP is a system, based on manual protein annotation, that identifies and semi-automatically annotates proteins that are part of well-conserved families or subfamilies: the HAMAP families. HAMAP is based on manually created family rules and is applied to bacterial, archaeal and plastid-encoded proteins. [More details / Reference / Disclaimer].

UniProtKB/Swiss-Prot Release 56.2 of 23-Sep-2008
UniProtKB/TrEMBL Release 39.2 of 23-Sep-2008

HAMAP proteomes HAMAP families
Archaea (53 proteomes)
Bacteria (648 proteomes)
Plastids (138 proteomes)
Total 839 proteomes (summary statistics)
 e.g.: recA, MF_01633, Iron
The wildcard * is supported.

Browse HAMAP families.
HAMAP tools
Scan a sequence against the HAMAP families - quick scan
Enter your sequence or a UniProtKB (Swiss-Prot or TrEMBL) ID or AC:



   Matches against the HAMAP families
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Last modified 23-Sep-2008 by COL

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