ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us HAMAP Swiss-Prot
Search for

Home Proteomes Families Documents Downloads Links
HAMAP-Scan

This form should be used to submit several protein sequences or a whole genome (all ORFs) to HAMAP-Scan. Your sequence(s) will be scanned against the HAMAP family profile collection. Sequences, selected on the base of their match score, will be processed by our semi-automatic annotation system to be partly or completely annotated in the UniProtKB/Swiss-Prot format. [To see more details about our semi-automatic annotation system please refers to the UniRule format document].

You will receive an e-mail when your HAMAP-Scan results are available, even if no matches have been found. Your results will be available for one month on our server (see HAMAP-Scan results).
Note: Text boxes labeled with a * are obligatory.

Submit sequence(s) to HAMAP-Scan
Enter a valid numeric TaxID from the NCBI or NEWT taxonomy database.

This TaxID must represent the organism from which the sequences originate. All sequences must originate from the same organism which should be a bacterium or an archaeon. If this organism is not yet listed in the taxonomy database, please enter the TaxID for a very similar species, or the TaxID of a more general taxonomic node (e.g. for Actinobacteria).

NCBI TaxID: *
A file in FASTA format containing the sequence(s) to be scanned.

File name: *
Enter a password (or leave blank). If you enter a password, then the same password will be requested before you can download your results.

Password:
Enter your e-mail address. You will be notified by e-mail when your request is completed.

E-mail: *

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us HAMAP Swiss-Prot
Hosted by ch flag SIB Switzerland Mirror sites: Australia Brazil Canada China Korea