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HAMAP: Xylella fastidiosa (strain Temecula1 / ATCC 700964) complete proteome

General information

Species:  Xylella fastidiosa (strain Temecula1 / ATCC 700964)
Species code: XYLFT
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella (TaxID: 183190) [NEWT/ NCBI]
Description: Xylella fastidiosa strain Temecula was isolated from a naturally infected grapevine with Pierce's disease in a wine-grape-growing region of California. This disease is characterized by wilted, shriveled, raisin-like fruits and scorched leaves that detach, leaving bare petioles attached to the canes. This devastating disease is a major threat to the viability of the California wine industry.
Properties: Presence of flagella: No
Interaction: Plant pathogen
Number of membranes: 2
Number of inteins:0
Statistics: Number of XYLFT entries in the UniProt Knowledgebase: 2007 (492 in UniProtKB/Swiss-Prot + 1515 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    Temecula1 / ATCC 700964
Genome structure:
• Chromosome EMBL accession number AE009442 (circular; 2,519,802 bp) (download entry) (download Genome Reviews).
• Plasmid pXFPD1.3 EMBL accession number AE009443 (circular; 1,346 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] MEDLINE=22421331; PubMed=12533478; [ NCBI , EBI , Israel , Japan ]
Van Sluys M.A., de Oliveira M.C., Monteiro-Vitorello C.B., Miyaki C.Y., Furlan L.R., Camargo L.E.A., da Silva A.C.R., Moon D.H., Takita M.A., Lemos E.G.M., Machado M.A., Ferro M.I.T., da Silva F.R., Goldman M.H.S., Goldman G.H., Lemos M.V.F., El-Dorry H., Tsai S.M., Carrer H., Carraro D.M., de Oliveira R.C., Nunes L.R., Siqueira W.J., Coutinho L.L., Kimura E.T., Ferro E.S., Harakava R., Kuramae E.E., Marino C.L., Giglioti E., Abreu I.L., Alves L.M.C., do Amaral A.M., Baia G.S., Blanco S.R., Brito M.S., Cannavan F.S., Celestino A.V., da Cunha A.F., Fenille R.C., Ferro J.A., Formighieri E.F., Kishi L.T., Leoni S.G., Oliveira A.R., Rosa V.E. Jr., Sassaki F.T., Sena J.A.D., de Souza A.A., Truffi D., Tsukumo F., Yanai G.M., Zaros L.G., Civerolo E.L., Simpson A.J.G., Almeida N.F. Jr., Setubal J.C., Kitajima J.P. ;
"Comparative analyses of the complete genome sequences of Pierce's disease and citrus variegated chlorosis strains of Xylella fastidiosa.";
J. Bacteriol. 185:1018-1026(2003).
Web links:
Official genome site(s):
http://aeg.lbi.ic.unicamp.br/world/xfpd/
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Xylella&GLspecies=fastidiosa&GLstrain=Temecula1
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid183190%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Xfas_TEMECULA1
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Xylella_fastidiosa.html
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p285_Xyl_fasti
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntxf02
 EBI Proteome Analysis page



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