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HAMAP: Corynebacterium efficiens complete proteome

General information

Species:  Corynebacterium efficiens
Species code: COREF
Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Corynebacteriaceae; Corynebacterium (TaxID: 152794) [NEWT/ NCBI]
Description: Bacteria from genus Corynebacterium are Gram-positive, nonmotile rods. Corynebacterium efficiens has been identified as a new glutamic-acid- producing species, isolated from soil and vegetables.
Properties: Presence of flagella: No
Human pathogen: No
Interaction: No
Number of membranes: 1
Number of inteins:0
Statistics: Number of COREF entries in the UniProt Knowledgebase: 2945 (404 in UniProtKB/Swiss-Prot + 2541 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395
Genome structure:
• Chromosome EMBL accession number BA000035 (circular; 3,147,090 bp) (download entry) (download Genome Reviews).
• Plasmid pCE2 EMBL accession number AP005225 (circular; 23,743 bp) (download entry) (download Genome Reviews).
• Plasmid pCE3 EMBL accession number AP005226 (circular; 48,672 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] MEDLINE=22723752; PubMed=12840036; [ NCBI , EBI , Israel , Japan ]
Nishio Y., Nakamura Y., Kawarabayasi Y., Usuda Y., Kimura E., Sugimoto S., Matsui K., Yamagishi A., Kikuchi H., Ikeo K., Gojobori T. ;
"Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens.";
Genome Res. 13:1572-1579(2003).
[2] Kawarabayasi Y., Yamazaki J., Hino Y., Kikuchi H. ;
"The entire sequence of plasmid maintained by Corynebacterium efficiens YS-314.";
Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases.
Web links:
Official genome site(s):
http://www.bio.nite.go.jp/dogan/MicroTop?GENOME_ID=ce__G1
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Corynebacterium&GLspecies=efficiens&GLstrain=YS314
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid196164%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Ceff_YS314
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Corynebacterium_efficiens.html
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p305_Cor_effic
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntce01
 EBI Proteome Analysis page



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