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PROSITE entry PS52032


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS52032
Entry name [info] MARR_BRCT_CHROMO
Accession [info] PS52032
Entry type [info] MATRIX
Date [info] 08-NOV-2023 CREATED;
08-NOV-2023 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC52032
Associated ProRule [info] PRU01376

Name and characterization of the entry

Description [info] MarR-like, BRCT and chromo domains module profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=275;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=270;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.0134120; R2=0.0121575; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=699; N_SCORE=10.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=370; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-50; I=-50; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Post-processing [info]

COMPETES_HIT_WITH PS50172; PS50013

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_01 which contains 572'970 sequence entries.


Total number of hits 4 in 4 different sequences
Number of true positive hits 4 in 4 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] MarR-like
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
4 sequences

SMRC1_HUMAN (Q92922), SMRC1_MOUSE (P97496), SMRC2_HUMAN (Q8TAQ2), 
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PDB
[Detailed view]
6 PDB

6LTH; 6LTJ; 6YXO; 6YXP; 7VDV; 7Y8R