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PROSITE entry PS51797


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51797
Entry name [info] TCTP_3
Accession [info] PS51797
Entry type [info] MATRIX
Date [info] 01-MAY-2016 CREATED;
13-FEB-2019 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00768
Associated ProRule [info] PRU01133

Name and characterization of the entry

Description [info] Translationally controlled tumor protein (TCTP) domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=170;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=165;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=3.2623415; R2=0.0062509; TEXT='-LogE';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=12242.4501953; R2=10.6677265; PRIORITY=1; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=918; H_SCORE=22035; N_SCORE=9.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=518; H_SCORE=17768; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-51; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
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Post-processing [info]

COMPETES_HIT_WITH PS51796

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_01 which contains 572'970 sequence entries.


Total number of hits 89 in 89 different sequences
Number of true positive hits 89 in 89 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] TCTP
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
89 sequences

NF40_NAEFO  (P83728), TCTP1_ARATH (P31265), TCTP1_DICDI (Q54RX6), 
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PDB
[Detailed view]
15 PDB

1H6Q; 1H7Y; 1TXJ; 1YZ1; 2HR9; 2KWB; 2LOY; 3EBM; 3P3K; 4Z9V; 5O9K; 5O9L;
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