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PROSITE entry PS51771


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51771
Entry name [info] CGT_MARTX_CPD
Accession [info] PS51771
Entry type [info] MATRIX
Date [info] 01-AUG-2015 CREATED;
01-AUG-2015 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51771
Associated ProRule [info] PRU01107

Name and characterization of the entry

Description [info] CGT/MARTX cysteine protease (CPD) domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=182;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=177;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2334867; R2=0.0097780; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=1306; N_SCORE=15.0; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=437; N_SCORE=6.5; MODE=1; TEXT='RR';
/DEFAULT: M0=-28; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_01 which contains 572'970 sequence entries.


Total number of hits 9 in 9 different sequences
Number of true positive hits 9 in 9 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] Peptidase C80
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
9 sequences

MARTX_VIBCH (Q9KS12), MARTX_VIBVL (A0A2S3R7M0), TCDA_CLODI  (P16154), 
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PDB
[Detailed view]
28 PDB

3EEB; 3FZY; 3GCD; 3HO6; 4R04; 6AR6; 6EN3; 6OQ5; 7ML7; 7N8X; 7N95; 7N97;
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