PROSITE logo

PROSITE entry PS51659


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51659
Entry name [info] GT23
Accession [info] PS51659
Entry type [info] MATRIX
Date [info] 01-OCT-2012 CREATED;
01-OCT-2012 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51659
Associated ProRule [info] PRU00992

Name and characterization of the entry

Description [info] Glycosyltransferase family 23 (GT23) domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=292;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=287;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=3.2114680; R2=0.0097111; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=648; N_SCORE=9.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=339; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-51; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_01 which contains 572'970 sequence entries.


Total number of hits 14 in 14 different sequences
Number of true positive hits 14 in 14 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] GT23
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
14 sequences

FUT8_BOVIN  (Q9N0W2), FUT8_CAEEL  (G5EFE7), FUT8_CANLF  (Q659X0), 
» more

PDB
[Detailed view]
10 PDB

2DE0; 6VLD; 6VLE; 6VLF; 6VLG; 6X5H; 6X5R; 6X5S; 6X5T; 6X5U