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PROSITE entry PS51293


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51293
Entry name [info] SANT
Accession [info] PS51293
Entry type [info] MATRIX
Date [info] 01-FEB-2007 CREATED;
01-OCT-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51293
Associated ProRule [info] PRU00624

Name and characterization of the entry

Description [info] SANT domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=55; LOG_BASE=1.000693; P0=0.9972;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=55;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=3.2999885; R2=0.0002068; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=27563; N_SCORE=9.0; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=9188; N_SCORE=5.2; MODE=1; TEXT='RR';
/DEFAULT: B1=*; E1=*; MM=*; II=*;
...
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Post-processing [info]

COMPETES_HIT_WITH PS51294; PS50090

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_01 which contains 572'970 sequence entries.


Total number of hits 149 in 125 different sequences
Number of true positive hits 149 in 125 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 52
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 74.13 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Matrix type [info] protein_domain
Scaling database [info] window20
Author [info] PS_Langendijk_Genevaux
Feature key [info] DOMAIN
Feature description [info] SANT
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
125 sequences

ADA2_CANAL  (Q59WH0), ADA2_SCHPO  (Q9P7J7), ADA2_YEAST  (Q02336), 
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UniProtKB/Swiss-Prot
False negative sequences
52 sequences

ALY1_ARATH  (Q6A331), ALY2_ARATH  (Q6A333), ALY3_ARATH  (Q6A332), 
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PDB
[Detailed view]
151 PDB

1OFC; 1WGX; 1X41; 1XC5; 2CJJ; 2CQQ; 2CQR; 2CRG; 2CU7; 2ELK; 2EQR; 2IW5;
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