PROSITE entry PS51201
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry
| Entry name [info] | RCK_N |
| Accession [info] | PS51201 |
| Entry type [info] | MATRIX |
| Date [info] |
01-APR-2006 CREATED;
10-MAY-2017 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51201 |
| Associated ProRule [info] | PRU00543 |
Name and characterization of the entry
| Description [info] | RCK N-terminal domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=122; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=117; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0.0610848; R2=0.0058488; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=17763.1757812; R2=10.3503647; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=1187; H_SCORE=30049; N_SCORE=7.0; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=1101; H_SCORE=29159; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-17; D=-250; I=-1000; B0=*; B1=*; E1=-500; MI=-255; MD=-255; IM=-255; DM=-255; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-255; BD=-255; /M: SY='H'; M=-39,-61,-97, -7,-29,-12, 98,-51, 23,-48,-32, 1,-16, 20, 16, -4,-12,-56,-64, -4; /M: SY='V'; M= -7,-31,-64,-60, 36,-62,-45, 53,-56,-35, -8,-57,-59,-57,-95,-47,-10, 56, -9, 23; /M: SY='I'; M=-40,-21,-64,-59,-18,-47,-47, 61,-54,-10, 19,-57,-58,-54,-58,-37,-16, 47,-59,-40; /M: SY='I'; M=-40,-55,-67,-63,-11,-67,-64, 77,-60, 13, 2,-60,-59,-58,-61,-54,-35, 34,-58,-30; /M: SY='C'; M= 16, 77,-55,-44, -1,-41,-59, 48,-56, 16, 7,-55,-60,-55,-59,-42,-32, 34,-60,-39; /M: SY='G'; M=-32,-42,-46,-57,-63,-75,-41,-67,-51,-67,-57,-20,-47,-43,-52,-19,-45,-62,-29,-34; /M: SY='Y'; M= 22, 16,-47,-54, 37, 15, 4,-17,-42, 16, 21,-34,-59,-45,-50,-28,-32,-16, 36, 55; /M: SY='G'; M=-26,-56,-17,-43,-43,-65,-48,-67,-42,-65,-56, 30,-50,-41,-54, 13,-20,-56,-51,-54; /M: SY='R'; M=-24,-48, -1, 9,-49,-36,-12,-22, 9,-36,-27, 17, 1, 26, 73, -7,-15,-28,-61,-39; /M: SY='F'; M=-33,-47,-60,-49, 53,-45,-34, 31,-31, 8, 5,-24,-48,-39,-27,-20, -2, 50,-26, -2; /M: SY='G'; M= 8,-55,-47,-48,-53,-65,-52,-46,-47,-39,-46,-34,-50,-43,-53, -3, 5,-38,-57,-56; /M: SY='Q'; M=-16,-46,-31,-12, -1,-15, 0,-13, 12, -6, -8,-31,-46, 50, 40, 17, 1,-18,-36, 10; /M: SY='H'; M= 12,-40,-18, 0,-33, -9, 26, 2,-20,-12, -8, 11, -6, 5, 10, 20, 22,-12,-50, 3; /M: SY='V'; M= 0,-26,-63,-58,-12,-60,-58, 42,-54, 44, -5,-58,-55,-50,-58,-40, -5, 50,-58,-33; /M: SY='A'; M= 62, 25,-47,-46,-33, 0,-32, 1,-49, -2,-18,-30,-53,-46,-52, -3, -9, 13,-56, 4; /M: SY='R'; M=-10,-60, 19, 30,-54,-37, 18,-47, 32,-25,-19, -9,-41, 39, 52,-12,-13,-42,-61,-43; /M: SY='E'; M= 13,-51,-19, 36, -1,-26,-21, -4, -3, 4, 14, 0,-40, 17, 6, -6, 0, -7,-44, -6; /M: SY='L'; M=-33,-33,-40,-58, 6,-66,-44, 8,-59, 76, 22,-59,-62,-53,-53,-56,-43, -9,-38,-30; /I: I=-69; MI=-20; MD=-71; IM=0; DM=-71; /M: SY='R'; M= -3,-30, -6, 24,-41,-42, 16, -9, 18, -5, -9,-11,-39, 15, 28, 15, 5, 0,-60,-14; /M: SY='E'; M= 26,-56, 17, 36,-59, -8, 2,-42, 18,-39,-36, 9,-27, 26, 13, 14,-14,-42,-62,-38; /I: I=-20; MI=-20; MD=-21; IM=0; DM=-21; /M: SY='E'; M= -4,-36, -3, 37,-30,-35, 21,-33, -4,-12, -5, 13,-51, 31, 33, 2,-10,-45,-38, -8; D=-20; /I: I=-20; MI=-20; MD=-21; IM=0; DM=-21; /M: SY='G'; M=-24,-60, 27,-11,-59, 66, 9,-67, 3,-49,-54, 30,-41,-17, -9,-17,-42,-61,-37,-37; D=-20; /I: I=-20; MI=-20; MD=-21; IM=0; DM=-21; /M: SY='H'; M=-13, -7,-27, -7, -7,-37, 58, 36, -9,-16, 3, 14,-54, 1,-15,-31,-16, 19,-11, 30; /I: I=-64; MI=-20; MD=-65; IM=0; DM=-65; /M: SY='P'; M=-22,-61, 50, 33,-49,-34, -5,-52, 2,-54,-52, 9, 52, 17, 13, 8, -4,-44,-65,-44; /I: I=-69; MI=-20; MD=-71; IM=0; DM=-71; /M: SY='V'; M=-24,-46,-63,-59, 29,-64,-31, 36,-56, -5,-11,-58,-28,-56,-50,-47,-16, 68,-37, 37; /I: I=-76; MI=-20; MD=-77; IM=0; DM=-77; /M: SY='V'; M=-21,-35,-56,-51,-29,-55,-48, 26, 1, 21, 5,-47,-55,-44,-20,-11, 36, 53,-33,-25; /M: SY='V'; M= 21,-35,-61,-53,-18, 1,-59, 39,-56, 24, -3,-55,-58,-54,-58,-43,-37, 56,-59,-35; /M: SY='I'; M=-23,-37,-65,-59,-14,-61,-62, 72,-58, 23,-12,-58,-59,-56,-55,-43,-19, 48,-57,-17; /M: SY='D'; M=-35,-28, 88, 60,-61,-48, -7,-62,-32,-53,-30,-16,-46,-30,-42,-21,-18,-42,-74,-37; /I: I=-76; MI=-20; MD=-77; IM=0; DM=-77; /M: SY='K'; M=-11,-39, -8, 0,-13,-40, 20, -1, 24,-18, -6, 21, 11, 17, 19, 11, 12,-18,-59,-19; /M: SY='D'; M=-33,-56, 77, -7,-62,-35,-21,-52, -8,-49,-52, 61,-40, -2, -3, 22,-14,-41,-74,-48; /I: I=-69; MI=-20; MD=-71; IM=0; DM=-71; /M: SY='P'; M= -4,-62,-20, 42,-46,-27,-14,-23, 1,-27,-18,-40, 68, 17, 9, -4,-26,-28, 23,-25; /I: I=-69; MI=-20; MD=-71; IM=0; DM=-71; /M: SY='E'; M= 1,-58, 46, 55,-56,-31,-10,-46, 5,-45,-36, 10, -5, 13, -1, 5, 0,-30,-65,-44; /I: I=-69; MI=-20; MD=-71; IM=0; DM=-71; /M: SY='R'; M= 5,-37,-23,-18,-30,-45, 22, -7, 19, -5, -4, 10,-26, 14, 55,-19, -2, -1,-59,-25; /I: I=-69; MI=-20; MD=-71; IM=0; DM=-71; /M: SY='V'; M= 14, 33,-59,-40, -5,-45,-32, 38,-45, 16,-17,-40,-43,-47,-35,-24,-19, 53,-59,-11; /I: I=-33; MI=-20; MD=-3; IM=0; DM=-3; /M: SY='E'; M=-36,-68, 32, 59,-70,-57,-32,-69, 9,-65,-57, 11,-51, 39, 39,-33,-47,-65,-69,-56; D=-3; /I: I=-33; MI=-20; MD=-3; IM=0; DM=-3; /M: SY='E'; M= -8,-69,-18, 38,-45,-62, 0,-65, 14,-47,-48,-38,-48, 20, 29,-10, 6,-57,-47,-34; D=-3; /I: I=-33; MI=-20; MD=-3; IM=0; DM=-3; /M: SY='L'; M= 31,-57,-68,-61,-31,-62,-32, 7,-62, 54, 5,-65,-67,-56,-62,-53,-47,-12,-12, -8; D=-3; /I: I=-3; MI=-20; MD=-3; IM=0; DM=-3; /M: SY='R'; M= 40,-56,-51,-39,-66,-46,-29,-63, 1,-62,-53,-43,-58, 27, 59, 19,-38,-54,-58,-55; D=-3; /I: I=-3; MI=-20; MD=-3; IM=0; DM=-3; /M: SY='E'; M=-49,-77, 54, 55,-80,-67,-50,-80, -4,-75,-70,-34,-59,-10, 19,-43,-56,-74,-81,-66; D=-3; /I: I=-13; MI=-20; MD=-3; IM=0; DM=-3; /M: SY='G'; M=-49,-73, 41,-52,-79, 65,-58,-83,-58,-81,-72, 18,-64,-29,-66,-43,-58,-79,-77,-71; D=-3; /I: I=-13; MI=-20; MD=-3; IM=0; DM=-3; /M: SY='V'; M=-22,-23,-65,-30, 15,-70,-42, 21,-59, 9,-19,-60,-66,-60,-53,-44, 22, 35,-48, 29; D=-3; /I: I=-13; MI=-20; MD=-3; IM=0; DM=-3; /M: SY='P'; M=-43,-68,-10, 14,-63,-58, 45,-39, 3,-29, -3, 13, 53, 11, 27,-31,-10,-55,-64,-47; D=-3; /I: I=-3; MI=-20; MD=-3; IM=0; DM=-3; /M: SY='V'; M= 28, -8,-44,-47, 7,-26,-25, 23,-44,-16,-21,-47,-45,-48,-41,-25, 13, 56, -1, 10; /I: I=-76; MI=-20; MD=-77; IM=0; DM=-77; /M: SY='I'; M=-32,-51,-60,-44, 25,-65,-17, 47,-55, 24, 0,-54,-61,-40,-38,-48,-29, 47,-30, 47; /I: I=-76; MI=-20; MD=-77; IM=0; DM=-77; /M: SY='Y'; M=-23, 20,-36, -3, 32,-55, 36, 4,-13, -4,-30, 0,-36, 27, -7,-21,-17, 10,-31, 53; /I: I=-69; MI=-20; MD=-71; IM=0; DM=-71; /M: SY='G'; M= 15,-23,-39,-41,-59, 85,-37,-28,-51,-28,-36,-34,-51,-44,-57,-23,-41,-37,-57,-44; /M: SY='D'; M=-37,-46, 93, -5,-52,-39, -2,-56,-31,-62,-40, 44,-35,-24,-34, 12,-22,-45,-60,-43; /M: SY='A'; M= 59, 14,-28,-35,-35, 28,-47, -8,-41,-33,-34,-38, 33,-37,-52, -4,-18, -7,-59,-33; /M: SY='T'; M= 19, -3,-24,-25,-23,-25,-17,-22,-32, -4, -2,-14,-45,-29,-11, 33, 63,-16,-62,-18; /M: SY='D'; M=-27,-59, 67, 17,-43,-43, 20,-54, 0,-38,-40, 28,-42, 13, 28, 20,-18,-53,-44,-22; /M: SY='P'; M= -6,-52, 8, 39,-38,-35,-19, -6, -2, -7,-19,-24, 55, 10, 3,-11, -6, -8,-60,-30; /M: SY='D'; M= 7,-53, 57, 47,-52,-18, 22,-40, -6,-40,-32, 13,-37, 8,-16, 7, -9,-38,-67,-33; /M: SY='V'; M= 12,-34, -6,-34, 10,-44,-54, 24,-50, 17, -9,-34,-47,-46,-54, -7, 36, 43,-59,-35; /M: SY='L'; M=-44,-53,-45,-46,-15,-66,-44, -5,-57, 77, 23,-63,-55,-42,-41,-52,-42,-16, 41,-21; /M: SY='E'; M= 2,-49, -6, 45,-47,-49, 13,-11, 26, -1, -7,-18,-46, 16, 36,-13,-11,-23,-60,-40; /M: SY='E'; M= 18,-48, 9, 42,-48,-32, 18,-41, 21,-29,-26, -1,-48, 29, 30, 8,-14,-42,-61,-29; /M: SY='A'; M= 68,-24,-47, 3,-29,-37,-43, -4,-41, 16,-14,-42,-44,-30,-48,-15,-25, 5,-58,-47; /M: SY='G'; M=-26,-39, 18,-18,-59, 70, 27,-51, -9,-56,-53, 36,-15,-15,-10,-14,-35,-56,-43,-48; /I: I=-69; MI=-20; MD=-71; IM=0; DM=-71; /M: SY='I'; M= 16,-52,-58,-57,-16,-51,-39, 63,-51, 28, 1,-51,-17,-53,-58,-43,-21, 36,-46,-35; /M: SY='E'; M= 7,-52, 37, 47,-18, -9, 13,-45, 11,-40,-18, -7,-17, 18, 3, 8,-13,-42,-49,-31; /M: SY='D'; M=-25,-27, 37, 29,-60,-14, 35,-57, 20,-54,-46, 31,-42, 21, 35, 8, 4,-51,-56,-38; /M: SY='A'; M= 71, 23,-45,-44, 9,-40,-51, -6,-47,-25, 10,-44,-30,-38,-38, -9, -1, -3,-55,-12; /M: SY='D'; M=-10,-35, 71, 15,-57,-11,-11,-57, 27,-49,-45,-12,-34, -3, 33, 4,-26,-43,-67,-37; /I: I=-64; MI=-20; MD=-65; IM=0; DM=-65; /M: SY='M'; M= 31, 17,-55,-43,-28, -6, 5, 11,-44, 9, 35,-38,-56,-37,-27, -4, 7, 18, 18, -5; D=-64; /I: I=-64; DM=-65; /M: SY='V'; M= -6,-33,-65,-58, 36,-64,-58, 35,-58, 36, 11,-60,-61,-57,-58,-48,-38, 56,-44,-24; /M: SY='I'; M= -5,-24,-66,-60, -8,-60,-61, 61,-58, 26, 7,-59,-60,-56,-60,-51,-38, 56,-58,-31; /M: SY='A'; M= 43, 17,-54,-53,-31,-38,-57, 37,-52, 13,-19,-45,-51,-50,-55, -2, -2, 40,-61,-41; /M: SY='A'; M= 45, 16,-35,-49,-32,-14,-53,-12,-49, 18, 0,-42,-53,-47,-49, 10, 32, 25,-62,-46; /I: I=-40; MI=-20; MD=-40; IM=0; DM=-40; /M: SY='T'; M=-23,-22,-24,-40,-11, -8,-34, 27,-43, 5, 27,-25,-31,-33,-41, 11, 64, 1,-60,-17; /M: SY='D'; M= -9,-37, 44, -2,-59, 23, -6,-51,-21,-31,-28, 38, 42, -8,-26, 20, -7,-45,-66,-46; /M: SY='D'; M=-14,-57, 68, 15,-47,-22, 9,-36,-10,-49,-44, 49,-39, -5,-10, 21,-22,-34,-69,-22; /M: SY='D'; M=-24,-60, 83, 6,-38,-20, 2,-15,-17,-28,-16, -2, 19,-20,-17,-19,-15,-24,-69,-21; /M: SY='E'; M= 19,-56, 17, 57,-21,-31, 6,-18, -9,-25, -3, -3,-22, 19,-18, -6, -7,-17,-60,-28; /M: SY='T'; M= 22,-39, 18, 21,-31,-23,-19,-11, -8,-20,-18,-11,-29, 10, -4, 8, 29, 11,-62,-27; /M: SY='N'; M= 13,-49,-18,-36,-55,-30,-31,-25,-24,-42,-35, 92,-52,-27,-33, 24, 15,-19,-71,-51; /M: SY='I'; M= -9,-47,-36,-21,-21,-33,-41, 48,-24, 29, 33,-30,-39,-19, 2, -1,-11, 14,-50,-28; /M: SY='M'; M= -5,-51,-29, 7, 14,-47,-13, 17, 6, 27, 39,-23,-53, -5, 5,-21,-10, 8,-53, -5; /M: SY='I'; M= 32, -2,-53,-52,-33,-41,-50, 46,-45, 17, -2,-44,-55,-44,-26, 3, 14, 28,-60,-36; /M: SY='C'; M= 31, 65,-54,-52,-44,-31,-52, 18,-50, -1,-14,-45,-54,-49,-54, 11, 35, 33,-64,-31; /M: SY='L'; M= -4,-55,-13, 10,-22,-44, -5, 0, 0, 35, 32,-33,-42, 28, 4,-19, 2, -5,-18,-18; /M: SY='L'; M= 7,-39,-44,-27,-25,-43, 22, 10,-25, 30, 17, -2,-48, 7, -6, 5, 23, 1,-34, 4; /M: SY='A'; M= 60, 8,-56,-50, -5,-28,-41, 19,-51, 14,-16,-33,-55,-44,-52,-17,-25, 24,-58,-38; /M: SY='R'; M=-20,-37,-32,-13,-43,-42, 12,-44, 58, -4,-31,-22,-52, 16, 65,-22,-32,-41,-56,-16; /I: I=-40; MI=0; MD=-40; IM=0; DM=-40; /M: SY='E'; M=-17,-57, -3, 17,-45,-23, 5,-39, 17,-38,-45, -2,-46, 10, -1, 5, 1,-40,-73,-40; D=-40; /I: I=-40; DM=-40; /M: SY='L'; M=-14,-43, -5, 24,-19,-28, 20, -2, -1, 31, 6, -1,-50, 7, 10,-10, -5,-19,-38, -7; /M: SY='N'; M= -4,-28,-28,-38, 45,-21, 17,-23,-16, 13, 13, 55,-48,-26, -4,-14,-26,-29,-20, 26; /M: SY='P'; M=-22,-56, -5,-15,-34, 46,-17,-60, 1,-58,-52, 7, 80,-26,-20,-11,-31,-58,-57, -5; /M: SY='D'; M= 6, 0, 33, 2,-50,-16, 29, -5, -3,-36,-41, 18,-10, 10,-18,-11, 9, 28,-66,-31; /M: SY='P'; M= 2,-19,-28,-10,-35, -7,-29, 22, 21, 14,-17,-28, 36,-10, -5,-20,-10, 10,-58,-28; /M: SY='R'; M=-34,-43,-16, 0,-10,-42, 29,-36, 42,-40,-26, 7, 20, 14, 48,-18, 11,-46,-36, 17; /M: SY='I'; M=-22,-11,-59,-56,-34,-61,-60, 64,-16, 5,-22,-28,-56,-41,-33,-40, 24, 50,-61,-36; /M: SY='I'; M=-14,-22,-65,-59, 6,-60,-50, 65,-57, 14, 10,-58,-55,-55,-52,-38,-23, 46, 31, 3; /M: SY='A'; M= 64, 13,-53,-47,-42,-26,-54,-12,-48,-16,-34,-40,-52,-34,-42, 5, 7, 38,-42,-45; /M: SY='R'; M=-25,-37,-45, -4,-41,-54, -8,-11, 27, 2,-32,-37,-55, 3, 80,-17,-21,-15,-49,-26; /M: SY='A'; M= 52,-28,-46,-43,-21,-31,-55, 30,-48, 0,-14,-36,-49,-37,-45, -6, 16, 33,-59,-32; /M: SY='N'; M=-27,-47, 0, 15,-18,-29, 33,-21, -5,-20,-20, 42,-19, 18, 41, 10, -4,-33,-52, 8; /M: SY='D'; M=-23,-42, 56, 0,-37,-19, 1,-50, -7,-43,-41, 49,-44, -5, 9, 31, 8,-50,-64, 6; /M: SY='P'; M= -9,-59, 30, 23,-48,-30,-20,-22, -8,-15,-17,-11, 52, 8, 24, 6, -3,-22,-56,-17; /M: SY='E'; M= 9,-53, 35, 38,-43,-16, 4,-28, 5,-25,-26, 1,-31, 11, 12, 12, -4,-15,-54,-17; /M: SY='H'; M=-21,-47, 8, 20, -2,-35, 75,-42,-25,-13,-27, 36,-33, 10,-13, -9, -9,-42,-40, 50; /M: SY='A'; M= 27,-49,-19, 16,-36,-10, -9, 8, 1, 6, 1,-15,-45, -2, -1, -3, -9, 19,-47,-26; /M: SY='E'; M= 6,-47, 33, 36,-37,-31, 12,-31, 20,-23,-24, 4, -1, 10, 14,-10, -9,-27, 5, -7; /M: SY='H'; M= -3,-55,-19, 9,-18,-40, 19, 16, 17, 17, 3, -4,-16, 5, 5,-17,-15, 6,-55, 11; /I: I=-32; MI=0; MD=-33; IM=0; DM=-33; /M: SY='L'; M= -4,-34,-63,-50, 35,-59,-23, 3,-51, 62, 25,-53,-52,-42,-41,-35,-28, -1,-43, 3; /M: SY='R'; M=-16,-53, -8, 23,-27,-33, 9,-29, 31,-15, -4, 0,-32, 28, 37, 0, -1,-31,-16, 21; /M: SY='R'; M= 2,-41, 17, 25,-42,-12, -4,-41, 32,-25, -9, -5,-30, 34, 35, 4, -6,-45,-40,-30; /M: SY='A'; M= 37,-48,-29,-16,-14,-23, 8, 17,-27, 29, -3, -9,-47,-13,-20, -5,-16, 11,-58,-31; /I: I=-46; MI=0; MD=-47; IM=0; DM=-47; /M: SY='G'; M=-25,-26,-11,-22,-47, 83,-15,-51,-23,-48,-41,-12, 4,-23,-44,-22,-34,-43,-21,-39; /M: SY='A'; M= 54,-28,-25,-38,-18,-37,-43, 39,-49,-14,-28,-23,-12,-31,-44,-27,-19, 35,-49,-33; /M: SY='D'; M=-27,-33, 82, 11,-32,-19, 19,-49,-26,-57,-46, 25,-26,-14,-14, 3, 13,-46,-72,-28; /M: SY='H'; M= 1,-46, -7, 24,-12,-39, 35, 6, -3, -8, -3,-15,-46, 7, 9, -3, 2, 13,-39, 22; /M: SY='V'; M= 12,-45,-48,-39, 0,-54,-41, 43,-53, -3, 0,-46,-36,-31,-52,-30,-11, 64,-59,-16; /M: SY='I'; M=-29, 5,-51,-31, 19,-50,-43, 60,-46, 8,-13,-38,-58,-41,-36,-19,-21, 48,-35, -8; /M: SY='S'; M=-22, -8,-23,-20,-11,-33, 15,-21,-31, -7, 14, 38, 20,-13, 12, 42, 6,-16,-41, 6; /M: SY='P'; M= -5,-62,-17, 32,-32,-18,-43,-35,-28,-22,-37,-44, 88,-31,-43, -1, -1,-21,-59,-16; /M: SY='E'; M= -8,-56, -4, 54,-10,-37, -8,-41, 2,-35,-13, -7, -7, 15, 7, 9, 27,-27,-36, 13; /M: SY='R'; M=-10,-57, 0, 17, 21,-42, 8, -9, 5, 13,-10,-17,-49, 24, 25, 0,-15,-11, -3, 4; /M: SY='E'; M= 1,-52, 19, 50,-18,-40,-27, 12,-25, 21, 2,-20,-39,-26,-28,-12, 6, -2,-60,-29; /M: SY='M'; M= 34,-35,-36,-44,-20, 7,-50, 10,-29, 2, 35,-39,-39,-33,-39, 20, 31, 11,-59,-32; /M: SY='A'; M= 51,-47,-26,-30,-50, 45,-47,-12,-36,-31,-30,-33,-50,-27,-41, 28, 3,-13,-49,-40; /M: SY='R'; M=-17,-36, 1, 16,-18,-27,-11, 1, 3, 19, 0, 7,-28, 10, 31, 8,-14,-11,-58,-16;» more |
Numerical results [info]
| Total number of hits | 153 in 139 different sequences |
| Number of true positive hits | 153 in 139 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 21 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 87.93 % |
Comments [info]
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | V_Lesaux |
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 2 |
| Feature key [info] | DOMAIN |
| Feature description [info] | RCK N-terminal |
| Version [info] | 5 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
139 sequences
CPAA_BACSU (O31615), KCH_ECOLI (P31069), KEA1_ARATH (Q9ZTZ7), KEA2_ARATH (O65272), KEA3_ARATH (Q9M0Z3), KEFB_ALKAM (Q0ZAH7), KEFB_CITK8 (A8AQP0), KEFB_CROS8 (A7ME23), KEFB_ECO24 (A7ZSM6), KEFB_ECO27 (B7UK61), KEFB_ECO45 (B7MCW6), KEFB_ECO55 (B7L4M7), KEFB_ECO57 (Q8X878), KEFB_ECO81 (B7N1D2), KEFB_ECO8A (B7M1Q2), KEFB_ECOBW (C4ZUK6), KEFB_ECODH (B1X6K0), KEFB_ECOHS (A8A5F8), KEFB_ECOK1 (A1AGN6), KEFB_ECOL6 (Q8FCY0), KEFB_ECOLC (B1IPB4), KEFB_ECOLI (P45522), KEFB_ECOLU (B7NDV9), KEFB_ECOSE (B6I2Q9), KEFB_ECOSM (B1LHF1), KEFB_ECOUT (Q1R5T2), KEFB_ENT38 (A4WFE4), KEFB_ERWT9 (B2VK47), KEFB_ESCF3 (B7LS57), KEFB_KLEP3 (B5XN76), KEFB_KLEP7 (A6TEY9), KEFB_PECAS (Q6CZU5), KEFB_PECCP (C6DG97), KEFB_SALA4 (B5F8G9), KEFB_SALAR (A9MN27), KEFB_SALCH (Q57J15), KEFB_SALDC (B5FJN1), KEFB_SALEP (B5R2A8), KEFB_SALHS (B4TKN2), KEFB_SALNS (B4SUV7), KEFB_SALPA (Q5PL21), KEFB_SALPB (A9MT17), KEFB_SALPC (C0Q0D3), KEFB_SALPK (B5BH03), KEFB_SALSV (B4TXF9), KEFB_SALTI (Q8Z1Y7), KEFB_SALTY (Q8ZLL3), KEFB_SHIB3 (B2U3F5), KEFB_SHIBS (Q31VU0), KEFB_SHIFL (Q83PY0), KEFB_SHISS (Q3YWS1), KEFB_YERPA (Q1C2S9), KEFB_YERPE (Q8ZJC4), KEFB_YERPG (A9R473), KEFB_YERPN (Q1CCS7), KEFB_YERPP (A4TGX5), KEFB_YERPS (Q664Q5), KEFB_YERPY (B1JIU4), KEFC_CITK8 (A8ALQ4), KEFC_CROS8 (A7MIA0), KEFC_ECO24 (A7ZHE0), KEFC_ECO27 (B7UI93), KEFC_ECO45 (B7MAH0), KEFC_ECO55 (B7L4H0), KEFC_ECO57 (Q8XA20), KEFC_ECO5E (B5YZ83), KEFC_ECO7I (B7NHF1), KEFC_ECO81 (B7MNQ4), KEFC_ECO8A (B7M0E4), KEFC_ECOBW (C4ZPX3), KEFC_ECODH (B1XC48), KEFC_ECOHS (A7ZVZ9), KEFC_ECOL5 (Q0TLU2), KEFC_ECOL6 (Q8FLA1), KEFC_ECOLC (B1IRC9), KEFC_ECOLI (P03819), KEFC_ECOLU (B7N7S2), KEFC_ECOSE (B6HZ28), KEFC_ECOSM (B1LFY1), KEFC_ECOUT (Q1RGF1), KEFC_ENT38 (A4W6F3), KEFC_ESCF3 (B7LVT8), KEFC_KLEAE (Q9X756), KEFC_KLEP3 (B5Y1Z8), KEFC_KLEP7 (A6T4I3), KEFC_SALA4 (B5F767), KEFC_SALAR (A9MQG6), KEFC_SALCH (Q57TH4), KEFC_SALDC (B5FI29), KEFC_SALEP (B5R1S4), KEFC_SALHS (B4TJ42), KEFC_SALNS (B4T6L2), KEFC_SALPA (Q5PIL3), KEFC_SALPB (A9MYL9), KEFC_SALPC (C0Q4N0), KEFC_SALPK (B5BL23), KEFC_SALSV (B4TWT1), KEFC_SALTI (Q8Z9K0), KEFC_SALTY (Q8ZRW2), KEFC_SHIB3 (B2U255), KEFC_SHIBS (Q326I6), KEFC_SHIF8 (Q0T8E8), KEFC_SHIFL (Q83SQ3), KEFC_SHISS (Q3Z5W2), KEFX_HAEIN (P44933), KTRA_BACSU (O32080), KTRA_VIBAL (O87952), KTRC_BACSU (P39760), MJK1_METJA (Q57604), MJK2_METJA (Q58752), MTHK_METTH (O27564), TRKA1_METMA (P0CW17), TRKA1_METMZ (P0CW16), TRKA2_METMA (P58936), TRKA_ARCFU (O29420), TRKA_AZOC5 (Q04856), TRKA_ECO57 (P0AGJ0), TRKA_ECOL6 (P0AGI9), TRKA_ECOLI (P0AGI8), TRKA_HAEIN (P71354), TRKA_HALED (E1V6C6), TRKA_METJA (Q58505), TRKA_METTH (O27333), TRKA_MYCTO (P9WFZ2), TRKA_MYCTU (P9WFZ3), TRKA_PYRAB (Q9UXU0), TRKA_PYRHO (O57719), TRKA_SALTI (P0A2K0), TRKA_SALTY (P0A2J9), TRKA_SHIFL (P0AGJ1), TRKA_STRCO (Q53949), TRKA_VIBAL (P39448), TVOK_THEVO (Q979Z2), Y1633_METJA (Q59027), Y323_MYCGE (P47565), Y461_MYCPN (P75322), Y534_METFV (P56509), YBAL_ECOLI (P39830), YUGO_BACSU (Q795M8)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
21 sequences
KCMA1_BOVIN (Q28204), KCMA1_CANLF (Q28265), KCMA1_CHICK (Q8AYS8), KCMA1_HUMAN (Q12791), KCMA1_MACMU (O18867), KCMA1_MOUSE (Q08460), KCMA1_PIG (O18866), KCMA1_RABIT (Q9BG98), KCMA1_RAT (Q62976), KCMA1_XENLA (Q90ZC7), KCNT1_CHICK (Q8QFV0), KCNT1_HUMAN (Q5JUK3), KCNT1_MOUSE (Q6ZPR4), KCNT1_RAT (Q9Z258), KCNT2_HUMAN (Q6UVM3), KCNT2_RAT (Q6UVM4), KCNU1_HUMAN (A8MYU2), KCNU1_MACFA (A5LFX5), KCNU1_MOUSE (O54982), SLO1_CAEEL (Q95V25), SLO_DROME (Q03720)» more |
| PDB [Detailed view] |
62 PDB
1ID1; 1LNQ; 1LSS; 1LSU; 2AEF; 2AEJ; 2AEM; 2FY8; 2HMS; 2HMT; 2HMU; 2HMV; 2HMW; 2OGU; 3EYW; 3FWZ; 3KXD; 3L9W; 3L9X; 3RBX; 3RBZ; 4EI2; 4J7C; 4J90; 4J91; 4L73; 4L74; 4L75; 4L76; 4RO0; 5BKI; 5BKJ; 5BKK; 5BUT; 6I8V; 6OLY; 6S2J; 6S5B; 6S5C; 6S5D; 6S5E; 6S5G; 6S5N; 6S5O; 6S7R; 6U5N; 6U5P; 6U5R; 6U68; 6U6D; 6U6E; 6U6H; 6UWN; 6UX4; 6UX7; 6UXA; 6UXB; 7ZP9; 7ZPO; 7ZPR; 8DJB; 8FZ7 » more |