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PROSITE entry PS50048


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS50048
Entry name [info] ZN2_CY6_FUNGAL_2
Accession [info] PS50048
Entry type [info] MATRIX
Date [info] 01-NOV-1997 CREATED;
01-OCT-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00378
Associated ProRule [info] PRU00227

Name and characterization of the entry

Description [info] Zn(2)-C6 fungal-type DNA-binding domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=31;
/DISJOINT: DEFINITION=PROTECT; N1=4; N2=28;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=-0.3; R2=0.011; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=801; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=619; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: D=-20; I=-20; B1=-20; E1=-20; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_01 which contains 572'970 sequence entries.


Total number of hits 445 in 445 different sequences
Number of true positive hits 445 in 445 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 33
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 93.10 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] K_Hofmann
Feature key [info] DNA_BIND
Feature description [info] Zn(2)-C6 fungal-type
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
445 sequences

AACUB_ASPA1 (A0A1L9WLF2), AACUR_ASPA1 (A0A1L9WLK2), ABL7_LEPMJ  (E5A7E3), 
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UniProtKB/Swiss-Prot
False negative sequences
33 sequences

AZPB7_ASPTN (Q0CF67), C6TF_LEPMJ  (E5AE39), DHC4_ALTCI  (A0A0N6WJC7), 
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PDB
[Detailed view]
33 PDB

1AJY; 1AW6; 1CLD; 1D66; 1F4S; 1F5E; 1HWT; 1PYC; 1PYI; 1QP9; 1ZME; 2ALC;
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