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PROSITE entry PS00600


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General information about the entry

Entry name [info] AA_TRANSFER_CLASS_3
Accession [info] PS00600
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00519

Name and characterization of the entry

Description [info] Aminotransferases class-III pyridoxal-phosphate attachment site.
Pattern [info]
[LIVMFYWCS]-[LIVMFYWCAH]-x-D-[ED]-[IVA]-x(2,3)-[GAT]-[LIVMFAGCYN]-x(0,1)-
[RSACLIH]-x-[GSADEHRM]-x(10,16)-[DH]-[LIVMFCAG]-[LIVMFYSTAR]-x(2)-[GSA]-
K-x(2,3)-[GSTADNV]-[GSAC].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.


Total number of hits 1'049 in 1'049 different sequences
Number of true positive hits 1'049 in 1'049 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 39
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 96.42 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] pyridoxal_phosphate at position 19
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
1049 sequences

2AAAT_PSEPK (Q88FI7), ACLR_ACHOB  (Q7M181), AGT21_ARATH (Q940M2), 
» more

UniProtKB/Swiss-Prot
False negative sequences
39 sequences

BARAC_PYRHO (O57878), BFAT_VARPD  (H8WR05), BIOA_NITV2  (Q728P4), 
» more

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

ARGD_BACAM  (Q9ZJ10), BIOA_CITFR  (P13071)

		
PDB
[Detailed view]
191 PDB

1D7R; 1D7S; 1D7U; 1D7V; 1DGD; 1DGE; 1DKA; 1DTY; 1GBN; 1M0N; 1M0O; 1M0P;
» more