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PROSITE entry PS00455


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS00455
Entry name [info] AMP_BINDING
Accession [info] PS00455
Entry type [info] PATTERN
Date [info] 01-MAY-1991 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00427

Name and characterization of the entry

Description [info] Putative AMP-binding domain signature.
Pattern [info] 
[LIVMFY]-{E}-{VES}-[STG]-[STAG]-G-[ST]-[STEI]-[SG]-x-[PASLIVM]-[KR].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_01 which contains 572'970 sequence entries.


Total number of hits 1'273 in 1'011 different sequences
Number of true positive hits 1'246 in 984 different sequences
Number of 'unknown' hits 2 in 2 different sequences
Number of false positive hits 25 in 25 different sequences
Number of false negative sequences 89
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 98.03 %
Recall (true positives / (true positives + false negatives)) 93.33 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 12
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 984 sequences 

4CL1_ARATH  (Q42524), 4CL1_NARPS  (A0A2H5AIX5), 4CL1_ORYSJ  (P17814),
» more

UniProtKB/Swiss-Prot
False negative sequences		 89 sequences 

4CL1_DICDI  (Q54P77), 4CL2_DICDI  (Q54P78), 4CL3_DICDI  (Q54P79),
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 2 sequences 

4CL1_SOYBN  (P31686), PABL_STRGR  (P33585)


				
	

	

		UniProtKB/Swiss-Prot
'Unknown' sequences		
		
			2 sequences
			


			
ACYN_ASCSA  (P9WES4), PYDA_ACRSP  (A0A8F4S6Z6)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			25 sequences
			


			
AB1B_ARATH  (Q9ZR72), AGRG1_GORGO (Q50DM6), AGRG1_HUMAN (Q9Y653), 

			
			» more
			


				
	

	

		PDB
[Detailed view]		
		
			157 PDB
			


			1AMU; 1BA3; 1LCI; 1MD9; 1MDB; 1MDF; 1PG3; 1PG4; 1RY2; 1ULT; 1V25; 1V26; 
			
			

			» more